Entry information : CroPrx75(CRO_T027230 / CRO_T027228 / cra_locus_21998_iso_1_len_320_ver_3)
Entry ID 16420
Creation 2020-04-08 (Christophe Dunand)
Last sequence changes 2020-04-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-10 (Christophe Dunand)
Peroxidase information: CroPrx75(CRO_T027230 / CRO_T027228 / cra_locus_21998_iso_1_len_320_ver_3)
Name CroPrx75(CRO_T027230 / CRO_T027228 / cra_locus_21998_iso_1_len_320_ver_3)
Class Class III peroxidase    [Orthogroup: Prx150]
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx75
start..stop
S start..stop
NnPrx68 444 2e-158 9..326 6..319
NnPrx38 434 2e-154 30..326 30..324
PtPrx39 431 3e-153 18..326 7..319
CroPrx74 427 1e-151 1..326 1..324
Literature and cross-references CroPrx75(CRO_T027230 / CRO_T027228 / cra_locus_21998_iso_1_len_320_ver_3)
Protein sequence: CroPrx75(CRO_T027230 / CRO_T027228 / cra_locus_21998_iso_1_len_320_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   35752.8  
PI (pH):   %s   4.82
Sequence
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Send to Peroxiscan
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MTKYDQFFSL FILCFFFLIY FASAQVEVVL TPDFYDEVCP DALPIIRNVV NGAIQREPRM GASLLRLHFH DCFVNGCDGS NLLDDTTNFI GEKTAGPNIN SLRGFEVIDE IKAALNEACY  GNVVSCADIL AVAARDSVAL LGGPSYQVLL GRRDARTASF NDANANIPSP FFNLSQLLNN FKSQGLTLED LIALSGGHTI GLARCFVYLP RITNNINIDS NFRTSLQQNC PNLAAQNNNT 
APLDESTSTV FDTSYFQGLL QFKGLLQSDQ ELYKGDGSAS DGLVRYYSNN PKAFWADFSV SMIKMGNIKP LTGSNGEIRS NCRRIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic and EST (fragment). Predicted in CRO_T027230 but also found in the intron CRO_T027228
DNA
Send to BLAST
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ATGACAAAGT ATGATCAATT TTTTTCCTTG TTCATCTTAT GCTTCTTCTT CCTCATTTAT TTTGCATCTG CACAAGTAGA AGTAGTACTG ACACCTGATT TCTACGACGA AGTGTGTCCC  GATGCCTTGC CTATTATCAG AAATGTTGTT AATGGGGCAA TTCAGAGAGA GCCTCGAATG GGTGCTTCAC TCCTTCGCTT GCATTTTCAC GATTGTTTTG TCAATGTAAG TCTCTCCCAA  ACAAGAACGG AATCAAAAGA AGTAAAGAGT AGTTATCGTC TCTAACATTT GTCACCTGAC TTTGGACTGA ATTAATATTA ATAAATAGTA ATTATTTGTC GGTGGCAGGG CTGTGATGGA  TCAAACTTAC TTGATGACAC TACAAATTTC ATAGGAGAGA AGACAGCCGG TCCGAACATT AATTCCCTCA GGGGATTTGA GGTGATCGAC GAAATCAAAG CAGCCCTCAA CGAAGCATGC  TATGGTAACG TGGTTTCTTG CGCTGATATC TTAGCAGTAG CAGCACGAGA CTCTGTGGCT TTGGTAAACT TTTTTCTCAC CAGAGATAGA ACATAAAAAT AATTGTTTAA AAACCCTTGA  TTCCAAAATG GTCATTAATT TCTTGTTTAT AATTTTCTTC AGTTAGGAGG TCCATCCTAT CAAGTCTTAC TCGGAAGAAG AGATGCAAGA ACTGCAAGCT TCAACGATGC AAATGCCAAT  ATTCCATCTC CGTTTTTTAA CTTGTCACAA CTTTTAAACA ATTTTAAATC ACAGGGACTA ACTTTAGAAG ACCTGATTGC ACTTTCCGGT GGGCACACAA TTGGCCTTGC TAGATGTTTC  GTTTATTTAC CAAGAATTAC CAATAATATA AACATAGACT CCAATTTCAG AACTTCCTTG CAACAAAATT GTCCCAATTT AGCAGCACAA AATAATAACA CAGCCCCACT TGATGAATCG  ACTTCCACAG TTTTTGACAC TTCATATTTT CAGGGTTTGT TGCAATTTAA GGGTCTCCTT CAATCGGATC AAGAACTTTA TAAAGGTGAT GGTAGTGCAA GTGATGGCCT TGTTAGGTAC  TATAGTAATA ATCCTAAGGC ATTTTGGGCT GATTTTTCTG TTTCTATGAT CAAGATGGGT AATATTAAAC CTCTTACTGG AAGCAATGGA GAAATCAGGT CCAATTGCCG GAGAATTAAC 
TAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAAGT ATGATCAATT TTTTTCCTTG TTCATCTTAT GCTTCTTCTT CCTCATTTAT TTTGCATCTG CACAAGTAGA AGTAGTACTG ACACCTGATT TCTACGACGA AGTGTGTCCC  GATGCCTTGC CTATTATCAG AAATGTTGTT AATGGGGCAA TTCAGAGAGA GCCTCGAATG GGTGCTTCAC TCCTTCGCTT GCATTTTCAC GATTGTTTTG TCAATGGCTG TGATGGATCA  AACTTACTTG ATGACACTAC AAATTTCATA GGAGAGAAGA CAGCCGGTCC GAACATTAAT TCCCTCAGGG GATTTGAGGT GATCGACGAA ATCAAAGCAG CCCTCAACGA AGCATGCTAT  GGTAACGTGG TTTCTTGCGC TGATATCTTA GCAGTAGCAG CACGAGACTC TGTGGCTTTG TTAGGAGGTC CATCCTATCA AGTCTTACTC GGAAGAAGAG ATGCAAGAAC TGCAAGCTTC  AACGATGCAA ATGCCAATAT TCCATCTCCG TTTTTTAACT TGTCACAACT TTTAAACAAT TTTAAATCAC AGGGACTAAC TTTAGAAGAC CTGATTGCAC TTTCCGGTGG GCACACAATT  GGCCTTGCTA GATGTTTCGT TTATTTACCA AGAATTACCA ATAATATAAA CATAGACTCC AATTTCAGAA CTTCCTTGCA ACAAAATTGT CCCAATTTAG CAGCACAAAA TAATAACACA  GCCCCACTTG ATGAATCGAC TTCCACAGTT TTTGACACTT CATATTTTCA GGGTTTGTTG CAATTTAAGG GTCTCCTTCA ATCGGATCAA GAACTTTATA AAGGTGATGG TAGTGCAAGT  GATGGCCTTG TTAGGTACTA TAGTAATAAT CCTAAGGCAT TTTGGGCTGA TTTTTCTGTT TCTATGATCA AGATGGGTAA TATTAAACCT CTTACTGGAA GCAATGGAGA AATCAGGTCC 
AATTGCCGGA GAATTAACTA G 

Retrieve as FASTA