Entry information : CroPrx[P]76 (CRO_T029396)
Entry ID 16421
Creation 2020-04-11 (Christophe Dunand)
Last sequence changes 2020-04-11 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Peroxidase information: CroPrx[P]76 (CRO_T029396)
Name (synonym) CroPrx[P]76 (CRO_T029396)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value CroPrx[P]76
start..stop
S start..stop
HaPrx24 218 2e-70 105..265 176..332
HaPrx24 65 0.000000000002 1..80 1..74
MguPrx95 217 8e-70 111..255 187..332
MguPrx95 45 0.000006 61..80 61..80
MePrx79 216 3e-69 108..253 179..323
MePrx79 68 0.0000000000002 1..80 4..75
PpePrx68 210 5e-67 91..255 162..327
PpePrx68 77 2e-16 1..80 1..75
Literature and cross-references CroPrx[P]76 (CRO_T029396)
Protein sequence: CroPrx[P]76 (CRO_T029396)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   265
PWM (Da):   %s   29168.25  
PI (pH):   %s   8.46
Sequence
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Send to Peroxiscan
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MAKLGAVGLV ELVLVLALAI FGKVEGAGAP GLQVGFYRGK CRGDVDVEGI VRNVVVQAFR KDPTIVAALL RMQFHDCFVN IYLVSCYIWN SPYILNYGSW VLCYRHVIDV IDMVYLLGGH  TVGVAHCSLF QDRLYNFQNT GKPDPTMDAL LLNNLMKTCP QNAAFDNTTN LDQNPLSSLT VDNSFYRQIV LRKGVLQIDQ ELALDPLTKN SVNGIANGAD FNAKFAEALV KLGRVQVLIG 
EKQGEIRKSC RVVNKKSTFG GIPIF* 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Exon 2 and 3 are missing. Incorrect prediction (2 Prxs ORF are fused)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGAAAT TAGGCGCAGT GGGATTGGTG GAGTTGGTGT TGGTGTTGGC GTTGGCCATA TTTGGCAAGG TTGAGGGAGC AGGAGCACCG GGGTTGCAAG TTGGATTTTA TAGAGGAAAA  TGTAGGGGAG ATGTTGATGT GGAGGGAATT GTGCGTAATG TAGTGGTTCA AGCTTTCCGT AAAGACCCTA CCATTGTTGC TGCTCTACTT CGCATGCAAT TCCATGACTG CTTTGTTAAT  GTAAGAACCC AAATTTTAGT TTCATTCTTT TCATTTCATA ACCTTTTGTA TATGCATGCA TTTCTTACCC AAAAATTAAT GCACACAAAT GCATTATATA CCTTGTCATA AAATCTATAT  TCTACTAAAT TCATCCATTC TTTTTTACTT ATTATATTAT GTTAATTCTT TTATTTTATT TACTTATCAC ATTATAATTC TAAAATAATA TTTCATGAGC TTTTTGTTAA TATCTTCCCA  TTAATAACGA ATTCTAACAT TTTTTTATTC TTCTAACATG AAAATTTGTA AAATGAAAAA TTTTTGAAGA GTATTCTAGA CTTCTAGTTT ATACAAAAAT ATATATATAT ATAATATTCT  GTATTTTCTT AAATAGTGTA ATTTTCTAAA ATATAACAAG TAAAAAAACG AAGAAAGTAT ATTTTCATTG AGCTTTGTAT TTTATTTCTA CTAAAACATA ACATAACGAA GAAAGTATAA  CATAATATAG AATCATAATA CAAGATATAC CTTGAAGAAA GTATAACATA ATATAGAATC ATAATACAAG ATATACCTTG TATCGTGCTA TATATGGAAC TCTCCCTACA TCTTGAATTA  TGGTTCATGG GTCTTGTGTT ATAGACATGT TATAGATGTT ATAGACATGG TTTATCTTCT TGGTACGTAC CTATATATGT TTATTTAACT ACCCATATAT ATATATATAT ATATTTCCTA  ACAATTTTGT AACTTTGCCT TATTATACAC TCATAATCCT TTAGTTTCAA TTTTTAATTA TACACAAATA TCTATTCTTA AATCCTCTAA AAAATAAATA ATAATGTATA TAGAAAATTA  ATATTGAAAA TAACTCATTT TTTACCTATT CTTCTTTTTT TTTGGGACAT TTTTTACCTA ACATGCTTCA TGATATAAAA AAATGTCACA TCTTATGTCC ATGAGTGAGT GGGAGCGCAC  GATTTATGAG TCTGACAGCA CTCACAATCA ATTATAATTT GCAACAAAAA TGAATAGCTC AAAGTTTAAA ATAAATGTTT GGACACATTA TACTTATCTC ACATGCGCGA CAGAATTTCT  TCTATACAGA AGAGAGTTAA ATATATAAAT ATATATTTTG AAATTAGAAG AGTTAAATTC TTATAAACAA CATTTCATGA CATGGAACAA CTAGAGAGCA TATATGCTAG TAAAATTATC  AACTAATGAT AATTTTGTGG TTCATTTTTT GTGAAGGTGG TCACACAGTA GGAGTTGCTC ATTGTTCACT CTTCCAAGAT CGTCTTTACA ATTTCCAAAA CACCGGAAAA CCAGATCCAA  CCATGGACGC CTTATTATTA AACAATCTCA TGAAAACTTG TCCTCAAAAT GCAGCATTTG ATAACACCAC TAATTTAGAC CAAAACCCTC TAAGCTCATT GACAGTTGAC AATTCATTTT  ATAGACAAAT TGTATTAAGA AAAGGTGTTC TTCAAATTGA TCAAGAATTA GCTTTGGACC CTTTAACGAA AAATTCAGTA AATGGAATAG CAAATGGTGC TGATTTTAAT GCCAAGTTTG  CTGAAGCTTT GGTTAAACTT GGACGTGTTC AAGTACTAAT TGGTGAGAAG CAAGGTGAAA TTAGAAAATC TTGCCGTGTG GTGAACAAAA AATCTACATT TGGAGGGATT CCAATTTTTT 
GA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGAAAT TAGGCGCAGT GGGATTGGTG GAGTTGGTGT TGGTGTTGGC GTTGGCCATA TTTGGCAAGG TTGAGGGAGC AGGAGCACCG GGGTTGCAAG TTGGATTTTA TAGAGGAAAA  TGTAGGGGAG ATGTTGATGT GGAGGGAATT GTGCGTAATG TAGTGGTTCA AGCTTTCCGT AAAGACCCTA CCATTGTTGC TGCTCTACTT CGCATGCAAT TCCATGACTG CTTTGTTAAT  ATATACCTTG TATCGTGCTA TATATGGAAC TCTCCCTACA TCTTGAATTA TGGTTCATGG GTCTTGTGTT ATAGACATGT TATAGATGTT ATAGACATGG TTTATCTTCT TGGTGGTCAC  ACAGTAGGAG TTGCTCATTG TTCACTCTTC CAAGATCGTC TTTACAATTT CCAAAACACC GGAAAACCAG ATCCAACCAT GGACGCCTTA TTATTAAACA ATCTCATGAA AACTTGTCCT  CAAAATGCAG CATTTGATAA CACCACTAAT TTAGACCAAA ACCCTCTAAG CTCATTGACA GTTGACAATT CATTTTATAG ACAAATTGTA TTAAGAAAAG GTGTTCTTCA AATTGATCAA  GAATTAGCTT TGGACCCTTT AACGAAAAAT TCAGTAAATG GAATAGCAAA TGGTGCTGAT TTTAATGCCA AGTTTGCTGA AGCTTTGGTT AAACTTGGAC GTGTTCAAGT ACTAATTGGT 
GAGAAGCAAG GTGAAATTAG AAAATCTTGC CGTGTGGTGA ACAAAAAATC TACATTTGGA GGGATTCCAA TTTTTTGA 

Retrieve as FASTA