Entry information : AtrPrx28(AmTr_v1.0_scaffold00029.230)
Entry ID 16619
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx28(AmTr_v1.0_scaffold00029.230)
Name AtrPrx28(AmTr_v1.0_scaffold00029.230)
Class Class III peroxidase    [Orthogroup: Prx010]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx28
start..stop
S start..stop
AtrPrx60 644 0 1..321 1..321
AtrPrx45 622 0 1..321 1..321
AtrPrx30 591 0 1..321 1..324
AtrPrx[P]75 561 0 5..321 10..328
Literature and cross-references AtrPrx28(AmTr_v1.0_scaffold00029.230)
Protein sequence: AtrPrx28(AmTr_v1.0_scaffold00029.230)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321
PWM (Da):   %s   34861.59  
PI (pH):   %s   8.62
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSCSTAHIA TLLMILLCSM LLLCEGKQLS SKFYDSSCPN ALSTIRTAIH AAISAERRMG ASLIRLHFHD CFVNGCDASL LLDSTSSFES EQNAIQNIES ARGFQVIEKA KSRVESICPG  VVSCADILAV AARDSSVKLG GPSWTVKLGR RDSATASKSE AERELPLFTT PLDSLISRFR RKGLSAKDLV ALSGAHTIGQ AQCFTFRDRI YNHTNIDSGF ARKRRNRCPS NGGDSKLAPL 
DLVTPTSFDN NYFKILMQKK GLLESDQVLF NGGSTDEIVR SYSKSRSAFY SDFAEAMVKM GDIEPLTGSA GQIRARCSVP N* 

Retrieve as FASTA  
Remarks Also found in AmTr_v1.0_scaffold01371
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCTT GCTCTACTGC CCATATAGCA ACACTGCTCA TGATATTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGAA GCAGCTGAGC TCCAAGTTCT ATGATTCGAG CTGCCCCAAT  GCCCTCTCTA CCATCCGCAC CGCCATTCAT GCCGCGATAT CGGCAGAGAG GCGGATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCATGAT TGCTTTGTCA ATGGTTGCGA TGCATCGCTC  CTGTTGGACT CGACTTCCTC TTTCGAGAGC GAACAGAATG CCATTCAGAA CATCGAGTCT GCTAGAGGCT TCCAAGTCAT TGAAAAGGCA AAGTCGAGAG TGGAAAGCAT ATGTCCAGGT  GTGGTCTCCT GTGCAGACAT CCTTGCAGTT GCAGCAAGAG ACTCTTCTGT AAAGTTGGGA GGTCCATCGT GGACTGTAAA GCTAGGGCGA AGAGACTCTG CAACGGCAAG CAAGAGTGAG  GCAGAGAGAG AACTCCCTCT CTTCACCACT CCCTTGGACA GTCTCATCTC TCGCTTCCGC AGAAAGGGAC TCAGTGCCAA AGACTTGGTG GCTCTCTCTG GTGCACACAC AATAGGCCAA  GCCCAGTGTT TCACATTCAG AGACAGAATT TACAACCACA CCAACATCGA CTCTGGCTTT GCTCGCAAAA GGCGTAATCG CTGCCCTTCA AATGGTGGGG ACTCGAAGCT CGCACCGCTT  GACCTTGTTA CACCCACTAG CTTCGACAAC AACTACTTCA AGATTTTGAT GCAGAAAAAG GGTTTGTTGG AATCAGATCA GGTGCTGTTT AATGGTGGAT CAACTGATGA GATAGTGAGG  TCATATAGTA AGAGTCGCAG TGCTTTCTAC TCGGATTTTG CGGAGGCTAT GGTGAAGATG GGGGATATTG AGCCTCTTAC TGGATCAGCT GGGCAGATTA GGGCAAGGTG CTCCGTGCCC 
AATTGA 

Retrieve as FASTA