Entry information : AtrPrx44(AmTr_v1.0_scaffold00077.150)
Entry ID 16630
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx44(AmTr_v1.0_scaffold00077.150)
Name AtrPrx44(AmTr_v1.0_scaffold00077.150)
Class Class III peroxidase    [Orthogroup: Prx094]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx44
start..stop
S start..stop
AcoPrx101 460 1e-164 6..320 4..319
AcoPrx90 454 2e-162 3..320 5..317
AcoPrx38 454 3e-162 9..320 16..322
AcoPrx51 450 1e-160 14..320 19..326
Literature and cross-references AtrPrx44(AmTr_v1.0_scaffold00077.150)
Protein sequence: AtrPrx44(AmTr_v1.0_scaffold00077.150)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320
PWM (Da):   %s   34581.88  
PI (pH):   %s   7.66
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVHCPPNIS LSFLMFALMA GLGYAQLSVS FYANTCPSVF DTVRSGVQSA VNREPRMGAS IIRLFFHDCF VNGCDGGILL DDTSSFEGEK TAFGNNNSVR GFEVIDNLKA QVDRACGRSV  VSCADILAIA TRDSVVQLGG PSYSVPVGRR DARTASKSAA NSDLPAPFED LDPIIAKFNR KGFTPREMVA LSGAHTVGQS RCTAFRDRIY NDTNIDPAFA SSRQANCPRT GGDDNLAPLD 
PQSPNRFGNN YFQALLNRRG LLHSDQVLFN GGSVDSIVTT YSNNANTFFQ DFANAMMKMG NLGVLTGTQG EVRTNCRRFN * 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (PS was too short)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTGTGC ATTGTCCACC GAATATTTCT CTAAGTTTTC TCATGTTTGC TCTAATGGCT GGCTTGGGCT ATGCCCAGCT CTCGGTGTCC TTCTATGCCA ACACTTGCCC CTCTGTGTTT  GACACAGTCC GCTCAGGCGT GCAATCCGCT GTGAATAGAG AGCCCCGCAT GGGTGCATCG ATCATTCGCC TCTTCTTTCA TGATTGCTTC GTTAACGTGA GCCGAACATA ATGTCTCATT  TTTTTTTTCT CTTTCTTTTT TTTCTTTTCT CTTCTTGAAG TGTTTCATTT TAAGAAGATG TTATGAGTGA GGTTGAAGAA GCACAAGTTC ATTAGATTCT AATGGAATTC AAATTGTGCA  TCATGAGAGA GAGAGAGAGT ACTAAGAGTG GATCTTCAAG GAGAGAGAGA GAGTACTAAG AGAGGCTTTG AATTCACACA CATGATGAGT TTTTCGAGAA TAAGCCCAAA GCAGGTGGTA  GGGTGGTGGG TGACGTCCAG AGTTTCATTC TTACTAGGCC CCATGTTAAT ATTTTAGAAA AAAAAAAAAG ACAAGGAGAG AGACTAATGC CGGGGTTTTG AGGAGTGTTG TCAAATTCGC  TACGTTGTGA CCCCAGCCTT TGGATTTTAT GCCTAGACCA AAGCGAAGTA AAGCTTAGTG CTTCAGCTTT GGTTAGATTC AGGCTGCTTC GATTGGTTTG GGTCTGCTTC GGACCGACAT  GGCTTTTGCT TCAGCCTAAT CAAAGAAATA TCTATATAAA AGTATTTGAA TTCTTTATTT TTTATTTTGA GAGAGACATA TATCTTATGG TGTTTTTTTT TTCTGGTTGA CAGGGTTGTG  ATGGTGGGAT CCTATTGGAC GACACAAGCT CATTCGAAGG AGAGAAGACA GCATTTGGGA ACAACAACTC AGTGAGAGGG TTCGAAGTGA TCGATAATTT AAAGGCCCAA GTGGATAGAG  CATGTGGAAG AAGCGTTGTT TCATGTGCTG ACATCTTAGC CATTGCCACA CGTGACTCTG TGGTCCAAGT GAGTATTACT ATAATAACCT TTCTTACTTC AAATTTTTGA GAGAGAGACG  TTGTTGTAGT TAACATTAGA GAGAGAAAGA GACTATACTC GTTTACAGTA GAGGGAGAAT TTACAGTATA AAACTTCAAT GCAATAATAA TCTTCCTCTC TCTCTCTCTC TCTCTCTCAT  GGCAGTTAGG AGGCCCCTCC TACTCTGTAC CAGTTGGGAG AAGAGATGCA AGGACTGCAA GCAAGAGTGC AGCTAACAGC GACCTCCCCG CCCCTTTCGA GGACCTCGAC CCCATCATCG  CAAAATTTAA CCGAAAAGGA TTCACCCCGA GAGAGATGGT GGCCCTATCC GGTGCTCACA CTGTAGGCCA ATCCCGGTGC ACAGCTTTTC GCGATCGCAT ATACAACGAC ACCAACATCG  ATCCTGCCTT CGCATCGAGC AGGCAAGCAA ATTGCCCTAG AACCGGAGGC GACGACAACT TAGCACCATT GGATCCACAA AGTCCAAACC GTTTCGGAAA CAACTATTTT CAAGCCTTAT  TGAATAGGAG AGGGCTTCTT CACTCTGATC AGGTGCTCTT TAATGGTGGC TCTGTGGATT CTATAGTGAC CACTTATAGC AACAACGCTA ACACCTTCTT TCAAGATTTT GCCAATGCAA 
TGATGAAGAT GGGCAACTTG GGAGTCCTAA CAGGGACCCA AGGGGAGGTT AGAACTAATT GTAGGAGGTT TAATTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTGTGC ATTGTCCACC GAATATTTCT CTAAGTTTTC TCATGTTTGC TCTAATGGCT GGCTTGGGCT ATGCCCAGCT CTCGGTGTCC TTCTATGCCA ACACTTGCCC CTCTGTGTTT  GACACAGTCC GCTCAGGCGT GCAATCCGCT GTGAATAGAG AGCCCCGCAT GGGTGCATCG ATCATTCGCC TCTTCTTTCA TGATTGCTTC GTTAACGGTT GTGATGGTGG GATCCTATTG  GACGACACAA GCTCATTCGA AGGAGAGAAG ACAGCATTTG GGAACAACAA CTCAGTGAGA GGGTTCGAAG TGATCGATAA TTTAAAGGCC CAAGTGGATA GAGCATGTGG AAGAAGCGTT  GTTTCATGTG CTGACATCTT AGCCATTGCC ACACGTGACT CTGTGGTCCA ATTAGGAGGC CCCTCCTACT CTGTACCAGT TGGGAGAAGA GATGCAAGGA CTGCAAGCAA GAGTGCAGCT  AACAGCGACC TCCCCGCCCC TTTCGAGGAC CTCGACCCCA TCATCGCAAA ATTTAACCGA AAAGGATTCA CCCCGAGAGA GATGGTGGCC CTATCCGGTG CTCACACTGT AGGCCAATCC  CGGTGCACAG CTTTTCGCGA TCGCATATAC AACGACACCA ACATCGATCC TGCCTTCGCA TCGAGCAGGC AAGCAAATTG CCCTAGAACC GGAGGCGACG ACAACTTAGC ACCATTGGAT  CCACAAAGTC CAAACCGTTT CGGAAACAAC TATTTTCAAG CCTTATTGAA TAGGAGAGGG CTTCTTCACT CTGATCAGGT GCTCTTTAAT GGTGGCTCTG TGGATTCTAT AGTGACCACT  TATAGCAACA ACGCTAACAC CTTCTTTCAA GATTTTGCCA ATGCAATGAT GAAGATGGGC AACTTGGGAG TCCTAACAGG GACCCAAGGG GAGGTTAGAA CTAATTGTAG GAGGTTTAAT 
TGA 

Retrieve as FASTA