Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
321 (295) |
| PWM (Da): |
34995.68 (32130.3) |
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| PI (pH):
| 8.56 (8.93) |
Peptide Signal:
| cut: 27 range:27-321 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGSYSTGHIA TLLMILLCSM LLLCEGHQLR SNFYDSSCPN ALSTIRTAIR TAISAERRMG ASLIRLHFHD CFVNGCDASL LLDSTSSFES EQNAIQNIGS ARGFQVIEKA KSRVESICPG
VVSCADILAV AARDSSVKLG GPSWTVKLGR RDSATASKSE AERELPLFTA PLDSLISLFR RKGLSAKDLV ALSGAHTIGQ AQCFTFRDRI YNHTNIDSGF ARKRRNHCPS NGGDSKLAPL
DLVTPNSFDN NYFKILMEKK GLLESDQVLF NGGSTDEIVR SYSKSRSAFY LDFAEAMVKM GDIEPLTGSA RQIRARCSVP N*
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from Phytozome (splicing error intron 2). |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGTTCTT ACTCTACTGG CCATATAGCA ACACTGCTCA TGATACTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGCA TCAGCTGAGA TCCAACTTCT ATGATTCGAG CTGCCCCAAC
GCCCTCTCTA CCATCCGCAC CGCCATTCGC ACCGCGATAT CAGCAGAGAG ACGCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCATGAT TGCTTTGTCA ATGGTTGCGA TGCATCGCTG
CTGTTGGACT CGACTTCCTC TTTCGAGAGC GAACAGAATG CCATTCAGAA CATCGGGTCT GCTAGAGGCT TCCAAGTCAT TGAAAAGGCA AAGTCGAGAG TGGAAAGCAT ATGTCCAGGT
GTGGTCTCCT GTGCCGACAT CCTTGCAGTT GCAGCAAGAG ACTCTTCTGT AAAGTTGGGA GGTCCATCGT GGACAGTAAA GCTAGGGCGA AGAGACTCTG CAACGGCAAG CAAGAGTGAG
GCAGAGAGAG AACTCCCTCT CTTCACCGCT CCCTTGGACA GTCTCATCTC TCTCTTCCGC CGAAAGGGAC TCAGTGCCAA AGATTTGGTG GCTCTCTCTG GTGCACACAC CATAGGCCAA
GCCCAGTGCT TCACATTCAG AGACAGAATT TACAACCACA CCAACATCGA CTCTGGCTTT GCTCGCAAAA GGCGTAATCA CTGCCCTTCA AATGGCGGGG ACTCGAAGCT CGCACCTCTT
GACCTTGTTA CACCCAATAG CTTCGATAAC AACTACTTCA AGATTTTGAT GGAGAAAAAG GGTTTGTTGG AATCAGATCA GGTGTTATTT AATGGTGGAT CAACTGATGA GATAGTGAGG
TCTTATAGTA AGAGTCGAAG TGCTTTCTAC TTGGATTTTG CTGAGGCTAT GGTAAAGATG GGGGATATTG AGCCTCTTAC TGGATCAGCT AGGCAGATTA GGGCCAGGTG CTCAGTGCCC
AATTGA
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Retrieve as FASTA
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|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGTTCTT ACTCTACTGG CCATATAGCA ACACTGCTCA TGATACTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGCA TCAGCTGAGA TCCAACTTCT ATGATTCGAG CTGCCCCAAC
GCCCTCTCTA CCATCCGCAC CGCCATTCGC ACCGCGATAT CAGCAGAGAG ACGCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCATGAT TGCTTTGTCA ATGGTTGCGA TGCATCGCTG
CTGTTGGACT CGACTTCCTC TTTCGAGAGC GAACAGAATG CCATTCAGAA CATCGGGTCT GCTAGAGGCT TCCAAGTCAT TGAAAAGGCA AAGTCGAGAG TGGAAAGCAT ATGTCCAGGT
GTGGTCTCCT GTGCCGACAT CCTTGCAGTT GCAGCAAGAG ACTCTTCTGT AAAGTTGGGA GGTCCATCGT GGACAGTAAA GCTAGGGCGA AGAGACTCTG CAACGGCAAG CAAGAGTGAG
GCAGAGAGAG AACTCCCTCT CTTCACCGCT CCCTTGGACA GTCTCATCTC TCTCTTCCGC CGAAAGGGAC TCAGTGCCAA AGATTTGGTG GCTCTCTCTG GTGCACACAC CATAGGCCAA
GCCCAGTGCT TCACATTCAG AGACAGAATT TACAACCACA CCAACATCGA CTCTGGCTTT GCTCGCAAAA GGCGTAATCA CTGCCCTTCA AATGGCGGGG ACTCGAAGCT CGCACCTCTT
GACCTTGTTA CACCCAATAG CTTCGATAAC AACTACTTCA AGATTTTGAT GGAGAAAAAG GGTTTGTTGG AATCAGATCA GGTGTTATTT AATGGTGGAT CAACTGATGA GATAGTGAGG
TCTTATAGTA AGAGTCGAAG TGCTTTCTAC TTGGATTTTG CTGAGGCTAT GGTAAAGATG GGGGATATTG AGCCTCTTAC TGGATCAGCT AGGCAGATTA GGGCCAGGTG CTCAGTGCCC
AATTGA
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Retrieve as FASTA
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