Entry information : AtrPrx47(AmTr_v1.0_scaffold00029.236)
Entry ID 16633
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx47(AmTr_v1.0_scaffold00029.236)
Name AtrPrx47(AmTr_v1.0_scaffold00029.236)
Class Class III peroxidase     [Orthogroup: Prx011]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx47
start..stop
S start..stop
AtrPrx[P]73 457 3e-165 2..244 72..314
AtrPrx58 419 6e-150 2..248 52..299
AtrPrx78 406 6e-145 2..244 74..310
AtrPrx[P]59 401 6e-144 1..248 1..247
Literature and cross-references AtrPrx47(AmTr_v1.0_scaffold00029.236)
Protein sequence: AtrPrx47(AmTr_v1.0_scaffold00029.236)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   248
PWM (Da):   %s   26868.8  
PI (pH):   %s   4.22
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGCDGSLLLD DTSSFRSEKN SRANNNSARG FEVIDEVKSE VESICPGVVS CADILAVAAR DSSEAMGGPT WTVKLGRRDS ATASESAAND NLPTFRDNLE ELISLFSRKG LDRQDMVALS  GAHTIGQAQC FTFRERIYNE ANIDSGFSST RQSDCPTDDD DDELAPLDLV TPRSFDNNYF KNLVELKGLL HSDQVLFSNG STDGLVTTYS NSQSTFFTDF ASAMVKMGDI EPLTGSSGQI 
RANCRVPN* 

Retrieve as FASTA  
Remarks incorrect prediction (exon was not predicted due to N in the sequence)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGATGCG ATGGTTCGTT GTTATTGGAC GACACGTCGT CATTTAGAAG TGAGAAGAAC TCACGTGCCA ACAACAACTC AGCGAGAGGA TTCGAAGTGA TTGATGAGGT GAAATCAGAG  GTGGAGAGCA TATGCCCAGG CGTTGTATCG TGCGCTGACA TCCTGGCCGT TGCAGCAAGA GACTCATCAG AAGCTATGGG TGGACCAACA TGGACAGTGA AGTTGGGGAG AAGGGATTCA  GCCACTGCAA GCGAAAGTGC TGCCAATGAT AACCTCCCTA CATTTAGAGA TAACTTAGAA GAGCTCATCT CTCTCTTCTC TAGAAAAGGC CTTGACAGAC AAGATATGGT TGCTCTCTCT  GGTGCCCACA CCATTGGCCA AGCCCAATGC TTCACATTTA GGGAGAGAAT CTACAATGAG GCCAACATCG ACTCCGGATT CTCGAGCACA CGCCAAAGCG ATTGCCCGAC TGACGACGAC  GATGATGAAC TTGCCCCTCT TGATTTGGTC ACACCGAGAA GCTTTGATAA CAATTACTTC AAGAACTTGG TGGAGCTTAA GGGCCTATTG CACAGCGACC AGGTTTTATT TAGCAATGGA  TCCACTGATG GTTTGGTCAC AACTTACAGC AACAGTCAGA GCACTTTCTT TACGGATTTT GCTTCGGCTA TGGTGAAGAT GGGAGACATT GAGCCTCTCA CTGGTTCTTC TGGCCAAATT 
AGGGCTAATT GCCGAGTGCC CAACTAA 

Retrieve as FASTA