Entry information : AtrPrx49(AmTr_v1.0_scaffold00019.93)
Entry ID 16635
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx49(AmTr_v1.0_scaffold00019.93)
Name AtrPrx49(AmTr_v1.0_scaffold00019.93)
Class Class III peroxidase    [Orthogroup: Prx030]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx49
start..stop
S start..stop
EferPrx59 437 4e-155 33..332 32..331
NnPrx85 427 2e-151 32..333 11..312
NnPrx82 427 3e-151 30..333 33..336
RcPrx44 417 2e-147 1..333 1..327
Literature and cross-references AtrPrx49(AmTr_v1.0_scaffold00019.93)
Protein sequence: AtrPrx49(AmTr_v1.0_scaffold00019.93)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   333
PWM (Da):   %s   36237.16  
PI (pH):   %s   4.95
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLMPMYLSS PCFKLILLLC TLIILFAQPG TSSSLSLNFY EESCPNVEML VTDAVRSAST FDQTVPAKLL RLLFHDCMVE GCDGSVLVEG NGTERADPAN ASLGGFQVVE SAKALVEVFC  PSTVSCADVL VLAARDAVRL GGGPNVRVLM GRKDGRVSSE ANVRANIVDT TFDLDQMTKI FSSKALNLDD LVALSGAHTI GRSHCSAFSD RFAQDSKGKL TPTDPLLDKK YGNDLLSQCP 
RNADPSITVD NDPETGLVFD NVYYQNLVMG KGLFHSDSVL FGDTRTRNKV LRFAESEESF FEGWERSFLR LTSIGVKTGN QGEIRRLCRE ING* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (large part of the PS was missing)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTTAA TGCCCATGTA TCTCAGCTCT CCGTGCTTCA AACTTATCTT GCTTCTCTGC ACATTAATCA TCTTGTTTGC TCAACCTGGA ACTTCGTCCT CTCTCTCTCT TAATTTCTAT  GAAGAGTCAT GTCCAAATGT GGAGATGTTG GTGACAGATG CTGTGAGATC AGCTTCAACC TTCGACCAAA CTGTTCCTGC AAAACTCCTT CGCTTGCTAT TCCATGACTG CATGGTTGAG  GGATGTGATG GGTCTGTTTT GGTAGAAGGG AATGGGACAG AGAGGGCAGA TCCTGCAAAT GCATCTTTGG GAGGGTTTCA GGTTGTGGAA TCAGCGAAAG CGTTGGTTGA AGTCTTTTGT  CCCTCGACTG TTTCTTGTGC CGATGTACTC GTCTTAGCTG CTAGAGATGC TGTCCGATTG GGTGGAGGGC CAAATGTGAG GGTTTTAATG GGAAGGAAAG ATGGGAGGGT CTCATCGGAG  GCAAATGTGA GGGCCAACAT AGTGGACACC ACCTTCGACC TCGATCAAAT GACCAAAATC TTCTCCTCCA AAGCCCTCAA CCTAGATGAC CTTGTCGCCC TCTCAGGTGC TCATACGATC  GGTAGGTCAC ATTGCAGCGC ATTCAGTGAC CGTTTCGCTC AAGATTCAAA GGGCAAACTG ACACCCACTG ATCCTTTGTT AGATAAGAAG TACGGAAATG ACTTGTTAAG CCAATGCCCA  CGTAATGCAG ACCCTTCAAT TACAGTGGAC AATGACCCAG AAACCGGTTT GGTTTTTGAC AATGTCTATT ATCAGAATTT GGTGATGGGG AAGGGGTTGT TTCATTCTGA TTCAGTTCTT  TTCGGGGACA CGCGGACAAG GAATAAGGTG TTGAGATTTG CTGAGAGTGA GGAGAGCTTC TTTGAAGGTT GGGAGAGGTC GTTTTTGAGG CTCACCAGCA TAGGCGTGAA GACGGGGAAC 
CAGGGGGAAA TAAGAAGATT ATGCAGAGAG ATAAATGGAT GA 

Retrieve as FASTA