The peroxidases and oxidases database
Entry information : AtrPrx56(AmTr_v1.0_scaffold00083.49)
Entry ID 16641
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-13 (Christophe Dunand)
Peroxidase information: AtrPrx56(AmTr_v1.0_scaffold00083.49)
Name AtrPrx56(AmTr_v1.0_scaffold00083.49)
Class Class III peroxidase    [Orthogroup: Prx254]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx56
start..stop		 S start..stop
AtrPrx63 438 2e-156 1..292 9..300
AtrPrx[P]79 420 1e-149 74..329 2..255
EferPrx106 269 2e-89 24..327 19..326
EferPrx17 266 5e-88 27..326 22..325
Literature and cross-references AtrPrx56(AmTr_v1.0_scaffold00083.49)
Protein sequence: AtrPrx56(AmTr_v1.0_scaffold00083.49)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329
PWM (Da):   %s   35759.85  
PI (pH):   %s   7.73
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVATLVLSAF MVALGEAHKH RSQHHGLHVT FYEHTCPKVE SIVKDVVARA AAIHPGIIxx LTRIQFHNCF VTxCDASLLL DATPSRELVE KASPPNSYAL RGLEVLDDAK AQLEAACPCI  VSCTDTIALA TRDASVLVGI PHYSVPCGHR DSCSSRAIDV LNNLPAPFYD LPTLTHNFEY RNLNVEDFVA LSGAHSIVNA HCSSFGYGLY GHSHAYSMDK TYADELKHIC PPITLPCFTN 
PVVKLSKDST HKMDGSYYSC LRKNQAFLPL DHALMTSSKT RTIMRKMALH PDWWARKFGL AMEKIGTIGI LTGGQGEVRS SCRYVNGGE* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (conserved residues were missing due to frame shift). Pseudo or seuqnecing error?
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTAGCAA CCCTGGTTCT CTCCGCTTTC ATGGTAGCTC TCGGCGAGGC CCACAAGCAT CGGTCCCAAC ATCATGGCCT CCACGTCACA TTCTACGAAC ACACGTGCCC CAAGGTAGAA  TCCATCGTCA AGGACGTTGT GGCACGTGCG GCTGCTATCC ACCCCGGAAT CATCCCTGAC CCGCATTCAG TTCCACAATT GCTTCGTCAC GATGAGATTT TATTTGTGAG ATTGTATACT  AAGGGACCCT GTATCTTTAT TACAAGAAGG TCACAATTAA TTGGAGCTAT TCAATCTCAA ATTGGATAGA TTGGGGTGTG TCGCGGGAGA ACATTTTTTT TTTTTTGACT TTGAGTCTAG  ACAACCAGCC AATTTAATAA ACAAGTGTCT TTATATACCT TTCTTTTGTT TATTTGTAAA ATTTTACCCC TTTGTTGCAC ATATTGAATT TCTCAAAATT TTCATAGCTA GACTAGTATT  TTTTTTTTTC CAACTATAGA AAGAAAGTCT TATTATCTAA ATCAGAAGTA TACTTTAATC CTATCCACAA AACAGCTACC TAGGAGAAGT TTAATTTAAC CTAGGGTTTG TTAAATGTTT  TCCAATTCTA TGATATGAAC AATGTAAAAA AAAAAAAAAG ACAATAGTTT TAAGTCCTCA GGGTCTACAC TGACTATGGG ATTTGAGTGG GATGAGATTC CAATTTTTAA TGTTAATTTT  AGTGATTGTG ATGAATAGAG TTTATCTGCA AACTCTAGGA TTTAGAAAAT CCCTAAATTA GTTTTAACCC CAAGAATATA TAATCTTTTT CCCCTGTTTA GAATGAAATT GGATGTCTAG  CAATGATAAG AAGGGGCATC CAGCGTTAGT TCCCAAGGGT CACAACATTT ACAAAGAAAA AGGAACAATC TTGTATCATA TCACATTCTC CATTTGTTCA TGGGGAAAAA TTTTACTTTT  TCTGGAGTAG TTAAGCTGTA AGATTAAATG CAGTCCAAAG CTTAAACCTC TCTCTCACTC CCTCTGTTGT TAAAAGTAAA ACCACTTGGT TCCCTAATTG GCTTGGCGTA ATTTCTCTCT  CTCTCTTTCT AACCAACACC CAACTCACAG GGCTGTGATG CTTCCCTCCT CTTGGATGCA ACCCCAAGCC GCGAGCTCGT AGAGAAAGCC TCCCCCCCCC CCCAACTCCT ACGCCCTCCG  TGGCCTTGAG GTGCTCGACG ATGCCAAGGC CCAACTAGAA GCTGCCTGCC CATGTATTGT CTCCTGTACC GACACAATTG CCCTTGCTAC CCGTGACGCC TCTGTCCTTG TCGGCATCCC  CCACTACTCT GTTCCCTGTG GCCATCGTGA CAGCTGCTCA TCTCGAGCAA TCGATGTTCT AAACAACCTG CCTGCCCCCT TCTATGACCT CCCAACCCTA ACTCACAATT TCGAGTACAG  AAACCTCAAC GTAGAAGACT TCGTGGCCTT ATCAGGTGCT CACTCTATCG TGAATGCTCA TTGCTCTTCC TTTGGCTATG GGCTTTACGG GCATAGCCAT GCATACTCGA TGGACAAGAC  CTATGCTGAT GAGCTCAAGC ACATTTGCCC ACCGATTACT CTGCCATGCT TTACAAACCC GGTTGTGAAA TTGAGCAAGG ATTCGACACA TAAGATGGAC GGCTCGTATT ACAGCTGCCT  TAGGAAGAAC CAGGCCTTCT TGCCTTTGGA CCACGCTTTG ATGACTAGCT CTAAGACGAG GACGATCATG AGGAAGATGG CTTTGCACCC TGATTGGTGG GCTAGGAAAT TTGGTTTGGC 
GATGGAAAAG ATAGGAACGA TTGGGATTCT TACTGGTGGG CAGGGGGAGG TTAGGAGCTC TTGTAGGTAC GTCAATGGAG GGGAATAG 

Retrieve as FASTA