Entry information : AtrPrx57(AmTr_v1.0_scaffold00077.7)
Entry ID 16642
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx57(AmTr_v1.0_scaffold00077.7)
Name AtrPrx57(AmTr_v1.0_scaffold00077.7)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx57
start..stop
S start..stop
AtrPrx67 536 0 1..313 1..313
AtrPrx69 509 0 1..313 1..317
EguPrx23 482 1e-173 21..313 25..319
GrPrx38 479 2e-172 10..313 18..323
Literature and cross-references AtrPrx57(AmTr_v1.0_scaffold00077.7)
Protein sequence: AtrPrx57(AmTr_v1.0_scaffold00077.7)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   313
PWM (Da):   %s   33155.11  
PI (pH):   %s   5.59
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFSLLTFVM AFLSLSAASY AQLSSTFYNS SCPNALSTIQ TAVRSAVNNE SRMGASLLRL HFHDCFGCDG SLLLDDNATF TGEKTARPNN NSVRGFEVVD NIKSQLESLC PGVVSCADIL  AVAARDSVVV LGGSTWTVLL GRRDSTTASQ SAANSNIPAP TLNLSALITS FSNQGLNQTD LVALSGSHTI GQARCTSFRT HIYNETNINS TYATSLQANC PFSGGDNNLS PLDVTSPTVF 
DNEYYKNLVS QRGLLHSDQE LFNGGATDSQ VNGYTGSSST FFTDFANAMV KMGNISPLTG SSGEIRTNCR RVN 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (only exons 3 and 4 were predicted). Exons 1 and 2 were iincluded in scaffold00077.2 (61415 nt)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTCT CTCTCCTCAC CTTTGTGATG GCCTTCCTCT CTCTCTCTGC GGCCTCCTAT GCTCAGCTCT CTTCAACTTT TTACAACTCT TCTTGTCCAA ATGCCCTCTC AACAATTCAA  ACCGCAGTGC GAAGTGCAGT GAACAATGAG TCTCGCATGG GTGCATCCTT ACTTCGCCTT CATTTCCATG ACTGCTTTGG TTGTGATGGT TCTCTTCTAT TGGATGACAA TGCAACCTTC  ACCGGTGAGA AAACAGCAAG GCCAAACAAC AACTCAGTGA GAGGATTTGA AGTGGTAGAC AACATCAAAT CCCAATTGGA AAGCTTGTGC CCTGGTGTGG TCTCTTGTGC TGACATCTTA  GCCGTTGCGG CACGCGACTC CGTGGTTGTG CTTGGTGGGT CAACATGGAC GGTGTTATTA GGGAGGAGAG ATTCAACAAC TGCTAGTCAA AGTGCTGCAA ACTCCAACAT TCCTGCACCA  ACCTTAAATC TGAGTGCCCT CATCACAAGT TTCTCAAACC AAGGACTCAA CCAGACGGAT TTGGTGGCTC TTTCAGGTTC TCACACAATC GGTCAAGCTC GGTGCACCAG TTTTAGGACT  CACATTTACA ATGAAACCAA CATAAACTCA ACATATGCCA CATCGTTGCA AGCGAACTGC CCGTTCAGTG GAGGCGATAA CAATCTCTCA CCCCTCGATG TAACGTCGCC AACAGTCTTC  GACAACGAGT ATTACAAGAA CTTGGTGAGC CAGAGAGGAC TCCTGCATTC TGATCAAGAG CTCTTCAATG GAGGTGCAAC TGATTCTCAA GTCAATGGCT ACACCGGTTC CTCTTCAACT 
TTCTTTACAG ACTTTGCCAA TGCAATGGTG AAGATGGGAA ACATTAGTCC TCTCACAGGC AGTAGTGGGG AAATTAGGAC AAATTGTAGG AGGGTGAATT AG 

Retrieve as FASTA