Entry information : AtrPrx58(AmTr_v1.0_scaffold00029.232)
Entry ID 16643
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx58(AmTr_v1.0_scaffold00029.232)
Name AtrPrx58(AmTr_v1.0_scaffold00029.232)
Class Class III peroxidase    [Orthogroup: Prx010]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx58
start..stop
S start..stop
AtrPrx78 509 0 1..295 23..310
AtrPrx[P]73 476 1e-171 1..295 21..314
AtrPrx[P]59 471 1e-170 52..299 2..247
AtrPrx30 447 4e-160 1..299 26..324
Literature and cross-references AtrPrx58(AmTr_v1.0_scaffold00029.232)
Protein sequence: AtrPrx58(AmTr_v1.0_scaffold00029.232)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   299
PWM (Da):   %s   32559.92  
PI (pH):   %s   7.11
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MCYGHLSSNF YDSFCPHALS TIRSKIRSAI SAERRMGASL IRLHFHDCFV NGCDASLLLD DTSSFSSEKN ARANNNSTRG FEVIDAVKSK VESICPGVVS CADILAVAAR DSSKAVMGGP  TWTVKLGRRD SATASETDAN DNLPSFTDDL KELISLFSRK GLEPQDLVAL SGAHTIGQAQ CFTFRDRIHN EDNIDSSFAS TRQRSCPTSG SNTNLAPLDK VTPNSFDKSY FKNLVQLKGL 
LHSDQVLFNN DSTDSLVRTY SNSRSTFFAD FASAMVKMGD IEPLTGSSGQ IRTNCRVPN* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (only the last exon was predicted). Also found in scaffold00486
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTGTTATG GGCACCTGAG CTCCAATTTC TATGACTCAT TCTGTCCTCA TGCTCTCTCC ACCATCCGAT CGAAAATCCG GTCTGCGATA TCGGCAGAGA GGCGCATGGG TGCCTCCCTC  ATCCGCCTTC ATTTCCATGA CTGCTTTGTC AATGGATGCG ATGCTTCGTT GTTATTGGAT GACACGTCTT CATTTAGCAG TGAGAAGAAC GCACGTGCGA ACAACAACTC AACGAGAGGG  TTCGAAGTGA TCGACGCCGT TAAATCAAAG GTGGAAAGCA TCTGCCCAGG CGTTGTTTCA TGCGCTGACA TCCTTGCCGT AGCTGCAAGA GACTCTTCAA AAGCCGTAAT GGGAGGACCA  ACATGGACAG TGAAACTAGG CAGGAGGGAT TCAGCCACCG CAAGCGAGAC CGACGCGAAT GACAACCTCC CAAGCTTCAC AGATGACCTC AAAGAGCTCA TCTCACTCTT CTCCCGGAAG  GGCCTCGAAC CTCAGGACCT TGTCGCGCTC TCTGGTGCTC ACACCATAGG CCAAGCCCAG TGTTTCACTT TCAGAGATAG AATCCACAAC GAAGACAACA TCGACTCCAG TTTTGCGAGC  ACAAGACAGA GAAGCTGCCC AACATCTGGT AGTAACACCA ACTTGGCTCC TCTGGACAAA GTCACTCCAA ATAGCTTTGA TAAAAGCTAC TTCAAGAACT TGGTTCAATT GAAGGGCTTG  CTCCACTCTG ATCAAGTGTT GTTCAATAAT GACTCAACTG ATAGTTTGGT ACGAACGTAT AGCAACAGTA GGAGCACTTT CTTTGCGGAT TTTGCCTCAG CTATGGTGAA GATGGGAGAC 
ATTGAGCCTC TCACTGGTTC TTCAGGGCAG ATTAGGACTA ACTGTAGGGT ACCCAACTGA 

Retrieve as FASTA