Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
321 (295) |
PWM (Da): |
34882.55 (32077.2) |
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PI (pH):
| 8.36 (8.75) |
Peptide Signal:
| cut: 27 range:27-321 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGSCSTAHIA TLLMIVLCSM LLLCEGKQLS SKFYDSSCPN AFSTIRTAIH AAISAERPMG ASLIRLHFHD CFVNGCDASL LLDSTSSFES EQNAIQNIES ARGFQVIEKA KSRVESICPG
VVSCADILAV AARDSSVKLG GPSWTVKLWR RDSATASKSE AERELPLFTT PLDSLISLFR RKGLSAKDLV ALSGAHTIGQ AQCFTFRDRI HNHTNIDSGF ARKRRNRCPS NGGDSKLAPL
DLVTPTSFDN NYFKILMQKK GLLESDQVLF NGGSTDEIVR SYSKSRSAFY SDFAEAMVKM GDIEPLTGSA GQIRARCSVP N*
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Retrieve as FASTA
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Remarks |
Incorrect prediction from Phytozome (two independant predictions: scaffold00029.228 (54 end) and scaffold00029.229 (3' end)) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTCTT GCTCTACTGC TCATATAGCA ACACTGCTCA TGATAGTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGAA GCAGCTGAGC TCCAAGTTCT ATGATTCGAG CTGCCCCAAT
GCCTTCTCTA CCATCCGCAC CGCCATTCAT GCCGCGATAT CGGCAGAGAG GCCCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCACGAT TGCTTTGTCA ATGTGAGTTC TTAATATTTA
TGTTTAACAA TTCGTATCTA TCGATCTATT AATCTATTAG TCTGAATTTC TTTTAATCTA TTTATCAAAC TCGATCTATC TTATGAATGT GGGTGATCTT AGGTGTATGG ATATCTATGT
GCAGGGTTGC GATGCATCGC TGCTGTTGGA CTCGACTTCC TCTTTCGAGA GCGAACAGAA TGCCATTCAG AACATCGAGT CTGCTAGAGG CTTCCAAGTC ATTGAAAAGG CAAAGTCGAG
AGTGGAAAGC ATATGTCCAG GTGTGGTCTC CTGTGCCGAC ATCCTTGCAG TTGCAGCAAG AGACTCTTCT GTAAAGGTAA GCATATCAAA GCTAAAGATT AGCAGTTAAG AGCATGGGTT
CGAGTGCGAT CACTTTGTGC ATAAAAAACT AAAGATTAAC AGTTAGGACC GTTTCCATCT CACCCCTCCC CCTGCATACG TGGAAGCGAC ACCAAGGCCT TTCTAGTCTC ATTGTTCATG
ATTGAGGCTT ATAATTTTCA AGAGGATATT TCTAGTCTCA TTGTTCATGA TTGAGGCTTA TAATTTTCAA AAGGATAAAT ATATATAATT ATGATCGCAA TTAACTTTGG CTATTAGATC
TAAAATCGGT TAGATGTAGG TCTCCTATTA ATCGGGCTCA AAGTTCTAAA TGAAGTTTTC AAACTTTATA ATATAATATA CCTCAGGCTA TTAGATGTCA TATCGGACAG CTACATATAT
GATTGTGACC TTGTACGATT GCTAAAATAA AGAAAAAGTC TGTTTTTACT AATTTACTAC TTCTCCCAAA TTAAACAAGT TTATTGCATG TCTTAAACCA AGATTCAAGG CAAAGCAGTC
ATCCAAAATA AGTCATAAAA ATATTCATCC AAAATCGGTT TGAAGGGGTC AAAATATCAT CCTAACATTC GAAAACTGAT ATAGAAATAA ACTATATGCA GTTGGGAGGT CCATCGTGGA
CTGTAAAGCT ATGGCGAAGA GACTCTGCAA CGGCAAGCAA GAGTGAGGCA GAGAGAGAAC TCCCTCTCTT CACCACTCCC TTGGACAGTC TCATCTCTCT CTTCCGCAGA AAGGGACTCA
GTGCCAAAGA CTTGGTGGCT CTCTCTGGTG CACACACCAT AGGCCAAGCC CAGTGCTTCA CATTCAGAGA CAGAATTCAC AACCACACCA ACATCGACTC TGGCTTTGCT CGCAAAAGGC
GTAATCGCTG CCCTTCAAAT GGTGGGGACT CGAAGCTCGC ACCGCTTGAC CTTGTTACAC CCACTAGCTT CGACAACAAC TACTTCAAGA TTTTGATGCA GAAAAAGGGT TTGTTGGAAT
CAGATCAGGT GCTGTTTAAT GGTGGATCAA CTGATGAGAT AGTGAGGTCA TATAGTAAGA GTCGCAGTGC TTTCTACTCG GATTTTGCGG AGGCTATGGT GAAGATGGGG GATATTGAGC
CTCTTACTGG ATCAGCTGGG CAGATTAGGG CAAGGTGCTC CGTGCCCAAT TGATTGATTC TTGATAGGGA TTGTGGTTTA TGTTATTAAT TTGTTCTTTT TTAGACGAGG CCCTTTGTAA
TTGTATATTG TGGGGGCCTA TGTGCTTCTC ATT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTCTT GCTCTACTGC TCATATAGCA ACACTGCTCA TGATAGTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGAA GCAGCTGAGC TCCAAGTTCT ATGATTCGAG CTGCCCCAAT
GCCTTCTCTA CCATCCGCAC CGCCATTCAT GCCGCGATAT CGGCAGAGAG GCCCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCACGAT TGCTTTGTCA ATGGTTGCGA TGCATCGCTG
CTGTTGGACT CGACTTCCTC TTTCGAGAGC GAACAGAATG CCATTCAGAA CATCGAGTCT GCTAGAGGCT TCCAAGTCAT TGAAAAGGCA AAGTCGAGAG TGGAAAGCAT ATGTCCAGGT
GTGGTCTCCT GTGCCGACAT CCTTGCAGTT GCAGCAAGAG ACTCTTCTGT AAAGTTGGGA GGTCCATCGT GGACTGTAAA GCTATGGCGA AGAGACTCTG CAACGGCAAG CAAGAGTGAG
GCAGAGAGAG AACTCCCTCT CTTCACCACT CCCTTGGACA GTCTCATCTC TCTCTTCCGC AGAAAGGGAC TCAGTGCCAA AGACTTGGTG GCTCTCTCTG GTGCACACAC CATAGGCCAA
GCCCAGTGCT TCACATTCAG AGACAGAATT CACAACCACA CCAACATCGA CTCTGGCTTT GCTCGCAAAA GGCGTAATCG CTGCCCTTCA AATGGTGGGG ACTCGAAGCT CGCACCGCTT
GACCTTGTTA CACCCACTAG CTTCGACAAC AACTACTTCA AGATTTTGAT GCAGAAAAAG GGTTTGTTGG AATCAGATCA GGTGCTGTTT AATGGTGGAT CAACTGATGA GATAGTGAGG
TCATATAGTA AGAGTCGCAG TGCTTTCTAC TCGGATTTTG CGGAGGCTAT GGTGAAGATG GGGGATATTG AGCCTCTTAC TGGATCAGCT GGGCAGATTA GGGCAAGGTG CTCCGTGCCC
AATTGA
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Retrieve as FASTA
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