1. Browse the Database
  2. View Redoxidase
Entry information : AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Entry ID 16645
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Name AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx60
start..stop		 S start..stop
AtrPrx28 645 0 1..322 1..322
AtrPrx45 614 0 1..322 1..322
AtrPrx30 583 0 1..322 1..325
AtrPrx[P]75 554 0 5..322 10..329
Literature and cross-references AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Protein sequence: AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (295)
PWM (Da):   %s   34882.55 (32077.2) Transmb domain:   %s   i7-24o
PI (pH):   %s   8.36 (8.75) Peptide Signal:   %s   cut: 27 range:27-321
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSCSTAHIA TLLMIVLCSM LLLCEGKQLS SKFYDSSCPN AFSTIRTAIH AAISAERPMG ASLIRLHFHD CFVNGCDASL LLDSTSSFES EQNAIQNIES ARGFQVIEKA KSRVESICPG  VVSCADILAV AARDSSVKLG GPSWTVKLWR RDSATASKSE AERELPLFTT PLDSLISLFR RKGLSAKDLV ALSGAHTIGQ AQCFTFRDRI HNHTNIDSGF ARKRRNRCPS NGGDSKLAPL 
DLVTPTSFDN NYFKILMQKK GLLESDQVLF NGGSTDEIVR SYSKSRSAFY SDFAEAMVKM GDIEPLTGSA GQIRARCSVP N* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (two independant predictions: scaffold00029.228 (54 end) and scaffold00029.229 (3' end))
DNA ►
Send to BLAST
CDS►
Send to BLAST