Entry information : AtrPrx61(AmTr_v1.0_scaffold00711.2)
Entry ID 16646
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-11-13 (Christophe Dunand)
Peroxidase information: AtrPrx61(AmTr_v1.0_scaffold00711.2)
Name AtrPrx61(AmTr_v1.0_scaffold00711.2)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx61
start..stop
S start..stop
GhPrx04 267 3e-91 1..182 121..303
EgrPrx191 258 2e-87 1..182 136..317
EcamPrx191 258 2e-87 1..182 136..317
LePrx22 257 6e-87 1..182 137..318
Literature and cross-references AtrPrx61(AmTr_v1.0_scaffold00711.2)
Protein sequence: AtrPrx61(AmTr_v1.0_scaffold00711.2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   182
PWM (Da):   %s   19732.96  
PI (pH):   %s   10.17
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LGGPSWQVPL GRRDSTTASL SAANTQIPSP FANLSALISN FQSHGLNTRD LVALSGGHTI GLARCATFRR RIYNDTNIDQ TFANQRRGSC PVSGGDNNLA PLDGTPTSFD ARYFGDLIQR 
RGLLHSDQEL FNGGSADGIV RQYARFPRVF GNDFVNSMVK MSTISPLIGT QGEIRVNCRK VN* 

Retrieve as FASTA  
Remarks Scaffold border and small size 8kb. Only exonns 3 and 4 (and two times repeated).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTGGGAGGCC CCTCATGGCA AGTTCCACTT GGGAGGAGGG ACTCAACAAC GGCTAGCTTG AGCGCAGCAA ACACACAAAT CCCCTCTCCT TTTGCCAACC TCTCAGCCCT CATCTCCAAC  TTCCAAAGCC ATGGTCTCAA CACCCGTGAC CTCGTCGCCC TCTCCGGCGG GCACACCATC GGCCTTGCTC GGTGTGCAAC CTTCCGTAGA CGCATATACA ATGACACCAA CATTGATCAA  ACCTTTGCAA ACCAGAGAAG AGGCTCATGC CCTGTTTCTG GGGGAGACAA CAACTTGGCA CCATTGGATG GCACACCTAC TAGCTTTGAT GCACGCTATT TTGGTGACTT GATTCAAAGG  AGGGGACTGC TTCACTCTGA CCAGGAGCTC TTCAATGGTG GCTCTGCTGA TGGTATTGTG AGGCAATATG CCAGGTTCCC TAGGGTTTTT GGGAATGACT TTGTTAACTC TATGGTGAAA 
ATGAGCACTA TAAGTCCTCT TATTGGAACC CAGGGTGAGA TCCGTGTGAA TTGTAGAAAG GTGAACTAA 

Retrieve as FASTA