1. Browse the Database
  2. View Redoxidase
Entry information : AtrPrx63(AmTr_v1.0_scaffold00083.44)
Entry ID 16648
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-13 (Christophe Dunand)
Peroxidase information: AtrPrx63(AmTr_v1.0_scaffold00083.44)
Name AtrPrx63(AmTr_v1.0_scaffold00083.44)
Class Class III peroxidase    [Orthogroup: Prx308]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx63
start..stop		 S start..stop
AtrPrx56 438 2.26e-156 9..300 1..292
AtrPrx[P]79 319 3.06e-110 81..300 1..218
EferPrx17 235 2.42e-76 9..296 1..287
EferPrx106 233 1.96e-75 9..296 1..287
Literature and cross-references AtrPrx63(AmTr_v1.0_scaffold00083.44)
Protein sequence: AtrPrx63(AmTr_v1.0_scaffold00083.44)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   299 (274)
PWM (Da):   %s   32970.73 (30194.4)  
PI (pH):   %s   8 (8.00) Peptide Signal:   %s   cut: 26 range:26-299
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKAPSPMMML TTLLLFTVMV APGEAHKQWS QHHGLHVRFY EHTCPKVESI VKDVVAHAAA INPRIILGLI RIQFHDCFVT SCDASLLLDA TPSHELVEKA SPANSYTLRG LEVLDDAKAQ  LEAACLGIVS CVDTIALAAP DASVLVGIPH YSVPWGRRDS HLSRAIVVLN NLSTPFYDLP TSIRIF*SRN FKIGDFVVLS GSHSIGNALC PSFGYGLYGC SHVYSMYKSY ADELRQICPS 
ITLPGFTNSV VKLSKDSTHK MDDSYYNCLR KNHPLVPSDH ALMTSSETRR IVRKMALHPD * 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome. due to stop in frame. Sequencing error or pseudogene
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGGCCC CTAGCCCCAT GATGATGTTA ACAACCCTGC TTCTCTTCAC TGTCATGGTA GCCCCCGGCG AGGCCCACAA GCAATGGTCC CAACATCACG GCCTCCATGT CAGATTCTAT  GAACACACGT GCCCCAAGGT AGAATCCATC GTCAAGGATG TTGTGGCACA TGCAGCCGCT ATCAACCCCA GAATCATCCT TGGCCTCATC CGCATCCAGT TCCACGATTG CTTCGTTACG  GTGAGATTTT ATTTATGAGA TTGTATACGA TAAGACCCTG TATCTTTATT ACAAGAATGT CACAATTAAT TGGAGCTATT AGATGTCAAA TTTGATAGAT TGGGGTGTGT AATGAGGGAA  TTTTTTTTTG TTTTTTTACT TTGGGACTAG ACAATACTAC TCTTACAACC ACCCAATTCA ATAACTAATA GACAAGTGTC TTTATCTACC TTTCCTTTGT TTATTTGTAA AATTTCACCC  TTTTTTCATA TTTCTAAACT GAGTTTTATT CTCTTTTTTC TTAGTCACTT CTTGCACATT TTGAATTTCT TAAAATTTTC ACAGCTAAAC TAATGTTTTT TTTTTTTCTT TTCAAGTACT  GCTAGAAAGT CTTATTATCT CAATCAGGAG TATAATATAA TCCTATCTAA TTTACTATAT GCTATAAACA AGGTAAAAAG AAAAAAGAAA AAGAAAAAAA GACAATAGTT TTAAGTCCTC  ATGGTCTACA CTGACTATGG GAGTGGACAT TAGTTGGACC CTCTTTGGGA TGAGATTCCA ATTTTTAATG TTAAGTTTAC TGATTGAGAT GGATAGAGTT TATCTGCAAA CTCTAGGATT  CGAAAAATCC CTAGATTACT TTTAGCCTCA AGATTAAATA ATCCTTTTCC CCTGTTTAGA ATGAAGTTGG ATGTCTGGCA AATGATAAGA AGGGGCATCC AACGTTAGTT CCCATGGGCC  AAAACATTTA CAAAGAAGAA GGAACAATCT TATATCCTAT CACATTCTCC ATTTGTTCAT GGGGCAAAAT TTTGCTTTTT CTGGAGTAGT TAAGCTATAA GATCGGAAGC AGTCCAAAGC  TTAAAGTTCT CTGTCTCTCT CTCTTCCCCT CTCACTCCCC CTGTTGTTAA AAGTAAAACC ACCTGGTTCC CTAAGGGGCA TGGCTTAATT TCTTTCTCTC TCTCTCTCTT AACCAACACC  GAACTCACAG AGTTGTGATG CCTCCCTCCT CCTAGATGCA ACCCCAAGCC ACGAGCTCGT GGAGAAGGCC TCCCCCGCCA ACTCCTACAC CCTCCGTGGC CTCGAGGTGC TTGATGATGC  CAAGGCTCAG CTCGAAGCAG CTTGCCTCGG CATTGTCTCC TGTGTTGACA CAATTGCCCT TGCTGCTCCC GACGCCTCTG TCCTTGTCGG CATCCCCCAC TACTCTGTTC CCTGGGGCCG  TCGTGACAGT CACTTATCTC GAGCAATTGT TGTCCTAAAC AACCTGTCCA CCCCCTTCTA TGACCTCCCA ACCTCGATTC GCATATTCTA GTCCAGAAAC TTCAAAATAG GAGACTTCGT  GGTCTTATCA GGTTCTCACT CTATTGGAAA CGCTCTTTGC CCTTCCTTTG GCTACGGGCT TTATGGTTGT AGCCATGTAT ACTCGATGTA CAAGAGCTAT GCTGATGAGC TCAGGCAGAT  TTGCCCGTCG ATTACTCTGC CAGGCTTTAC GAACTCGGTC GTGAAATTGA GCAAGGATTC GACACATAAG ATGGACGACT CGTATTACAA CTGCCTTAGG AAGAACCATC CCTTAGTCCC 
TTCAGACCAC GCTTTGATGA CTAGCTCTGA GACGAGGAGG ATCGTGAGGA AGATGGCTTT GCACCCTGAC TAG 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGGCCC CTAGCCCCAT GATGATGTTA ACAACCCTGC TTCTCTTCAC TGTCATGGTA GCCCCCGGCG AGGCCCACAA GCAATGGTCC CAACATCACG GCCTCCATGT CAGATTCTAT  GAACACACGT GCCCCAAGGT AGAATCCATC GTCAAGGATG TTGTGGCACA TGCAGCCGCT ATCAACCCCA GAATCATCCT TGGCCTCATC CGCATCCAGT TCCACGATTG CTTCGTTACG  AGTTGTGATG CCTCCCTCCT CCTAGATGCA ACCCCAAGCC ACGAGCTCGT GGAGAAGGCC TCCCCCGCCA ACTCCTACAC CCTCCGTGGC CTCGAGGTGC TTGATGATGC CAAGGCTCAG  CTCGAAGCAG CTTGCCTCGG CATTGTCTCC TGTGTTGACA CAATTGCCCT TGCTGCTCCC GACGCCTCTG TCCTTGTCGG CATCCCCCAC TACTCTGTTC CCTGGGGCCG TCGTGACAGT  CACTTATCTC GAGCAATTGT TGTCCTAAAC AACCTGTCCA CCCCCTTCTA TGACCTCCCA ACCTCGATTC GCATATTCTA GTCCAGAAAC TTCAAAATAG GAGACTTCGT GGTCTTATCA  GGTTCTCACT CTATTGGAAA CGCTCTTTGC CCTTCCTTTG GCTACGGGCT TTATGGTTGT AGCCATGTAT ACTCGATGTA CAAGAGCTAT GCTGATGAGC TCAGGCAGAT TTGCCCGTCG  ATTACTCTGC CAGGCTTTAC GAACTCGGTC GTGAAATTGA GCAAGGATTC GACACATAAG ATGGACGACT CGTATTACAA CTGCCTTAGG AAGAACCATC CCTTAGTCCC TTCAGACCAC 
GCTTTGATGA CTAGCTCTGA GACGAGGAGG ATCGTGAGGA AGATGGCTTT GCACCCTGAC TAG 

Retrieve as FASTA