Entry information : AtrPrx64(AmTr_v1.0_scaffold00149.18 / AmTr_v1.0_scaffold00149.19)
Entry ID 16649
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-14 (Christophe Dunand)
Peroxidase information: AtrPrx64(AmTr_v1.0_scaffold00149.18 / AmTr_v1.0_scaffold00149.19)
Name AtrPrx64(AmTr_v1.0_scaffold00149.18 / AmTr_v1.0_scaffold00149.19)
Class Class III peroxidase    [Orthogroup: Prx046]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx64
start..stop
S start..stop
PtPrx83 404 6e-142 35..352 34..338
PpePrx23 403 3e-141 17..352 8..333
GmPrx105 401 8e-141 17..352 7..332
MtPrx90 393 2e-137 33..351 24..331
Literature and cross-references AtrPrx64(AmTr_v1.0_scaffold00149.18 / AmTr_v1.0_scaffold00149.19)
Protein sequence: AtrPrx64(AmTr_v1.0_scaffold00149.18 / AmTr_v1.0_scaffold00149.19)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   358
PWM (Da):   %s   39921.03  
PI (pH):   %s   7.33
Sequence
Send to BLAST
Send to Peroxiscan
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MARLWRLNSL SCASVSILVF VLLLNAMDVS CDDYLVPGYY RDSCPLVEDI VRRHVLMAIR KDPRMAASLL RLHFHDCFVM GCDGSVLLDS RGSIESEKGA DPNVNSVKGF EVVDSIKFAL  EIACPAIVSC ADILAMAARD SVVLRGGPNW DVYLGRRDSL TASFSGANKF IPLPNSTLQT LITNFQAQGL DPLDLVTLSG SHTIGYSRCL NFRQHIYSPL EQDEEEYAEG STPDYCSQQK 
KRKSKPDPVF RRILRSTCPI TGRDNSLTPL DYSTSVFFDN HYFLNLMQGK ALLQSDSSLL SSTYTKELVW AYASNPRLFY RKFASSMVKM GNINPLIGDQ GEIRQNCRFV NSQSLTSP* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome. Two independant and partial ORFs: AmTr_v1.0_scaffold00149.18 (5' end) and AmTr_v1.0_scaffold00149.19 (3' end).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCGTC TTTGGAGGCT CAACTCTCTC AGTTGTGCTT CTGTTTCTAT ATTAGTTTTT GTGCTTCTTT TGAATGCCAT GGACGTTTCA TGTGACGATT ACCTGGTTCC TGGCTACTAT  AGAGACTCAT GCCCCCTTGT GGAGGACATT GTGAGAAGAC ATGTCCTCAT GGCTATACGC AAAGATCCTC GCATGGCTGC ATCGCTACTT CGACTCCACT TTCATGATTG CTTCGTCATG  GTCTCTCTCT CTCTCACACA CGTACACACA CATATACACG CTCACTCATT TCACTATAAA TCGAGCCATG GACATCAATA ATGTTGCTCT TAATCCTAAA TAATTAGCCA TGATAGTTGC  TTGGTCATTT GGCGTCTCTC TCTCTCACAC AAACACATGC TCCCCACACA TACACGCATG CAAACATGTA CACATGTATC TAGAATTTGA GCTTTGGACA TCAGGAATGT GGCCCTTACA  CCTTAACTAC TTAGCCATGA CAAATTTCAC ATCTCTCTCT GTGGGGTGTG TGCGTGTGTG TTTTGACATG CATACGAAAG GCAGGGGTGT GATGGATCGG TGTTACTAGA CAGCAGAGGG  AGCATAGAGA GTGAGAAGGG GGCCGATCCC AACGTTAATT CAGTCAAAGG ATTCGAGGTG GTGGATTCTA TCAAATTTGC ATTGGAGATT GCATGCCCAG CTATTGTTTC TTGTGCCGAT  ATCTTGGCCA TGGCTGCTCG CGACTCCGTC GTCCTGGTAA AAACTTTTAG AGGATAAATT CATGGATGTG CTAGATATAG AGATACCTTC TTTTTCTTTT CCCACTTGGA AAGAAGTGCG  TAAGCAGGGA TTTGTTTTTT GACAAATTGG TAAGTAGGGA TTTTAAGTAG AGGTCTAAAA ATCAGATCAG TGCTACGGAT TCTTGATTCA CCAGTACGGA TCGGCAATCC AGAGCAGTGT  ACTATATGAC TTAGAAAAAA CAAAAAGATT TTCAACACTC GCAGGAATAG GGCGGCTTTG AGCTTCCCTA CACCTGGTCA TTCCCTCCAT TGTTTTGAAT CAATCCGGCG TTTTTCGCCC  CATCAATTTT TTGAAACCCT GACTTGAAGT GTTCAGACTT TGAATATTTT GTCCCATTAG GCCAGGAAAC GTGATTCAAC TAACGTATGG CTTGTGGTTG TTTTCTATTG ACATGTAGAG  AGGAGGGCCC AATTGGGATG TATACTTGGG GAGAAGGGAT TCTCTAACTG CAAGCTTCAG TGGCGCTAAT AAATTCATCC CATTACCGAA TTCCACCCTC CAAACTCTCA TCACCAACTT  CCAAGCTCAA GGTCTGGACC CTCTAGATCT AGTAACACTA TCCGGTACTC TCTCTCTCTC TCTCACGCAC ATACACAAAC ACATAGGATA TAGCGATATC AATGTTATCA ACCTCCAATT  GGCCATGGAA CCAGTTTGAG GATCAATACC GGTTCGGATG CTAAATTAAA TAAAGAAAAA TAGTAAGAAT GACTTAAATA TATGAAATAT ATTAATAAAA GTTGTCCAAC ATTGTTTGGT  CAATCTAACT GATAAAAAAT GAGTGTCCAA TTGGTTGAAA CCCATCAATA GTTCATTTTG TCAGTTTTAG TTTTGAACTT GGCCCACCAA GGCATCGGTT GGGAATCCAA AGGGTTGGAC  AAACCAGGCT AATTTGGTCT TGATAACATT GGTCAATACT CATTACTGCA ATATGCCCAA ATATCTTTGT TTCTAGCAAT TACATTTGTC AACAGTTAAT TGTTAAATTG CTCCTTGGAA  TTTAGTCTAG CAAAAACAAC CCAAAAGAAA AGTATTTTGA ATCCAAAATT CCAAATTCTC TTTTCTGACT CAAAATTCAG AAGTAAAACC AACGTTGTGA AGCTGGATGA AATCAACAGG  GAGCCATACA ATTGGCTACT CAAGGTGCTT GAACTTTAGA CAACATATCT ATTCCCCACT AGAACAAGAT GAAGAAGAAT ATGCAGAAGG AAGCACGCCA GACTACTGTT CTCAACAAAA  AAAGAGAAAA AGCAAGCCAG ACCCTGTCTT TCGAAGAATT TTGCGCTCGA CATGCCCGAT TACAGGGAGG GACAACAGTC TAACGCCATT AGACTATTCA ACTTCGGTTT TCTTTGACAA  TCATTACTTC CTGAACCTCA TGCAAGGGAA GGCTCTTTTA CAGTCTGATA GCTCCCTCCT CTCTTCAACG TACACAAAGG AGCTAGTGTG GGCCTATGCA TCGAACCCAC GCCTCTTTTA 
CAGAAAGTTT GCATCATCCA TGGTGAAGAT GGGAAACATC AACCCTCTCA TTGGAGACCA GGGAGAGATA CGACAAAATT GTCGATTCGT GAACTCGCAG AGTTTGACGA GCCCATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCGTC TTTGGAGGCT CAACTCTCTC AGTTGTGCTT CTGTTTCTAT ATTAGTTTTT GTGCTTCTTT TGAATGCCAT GGACGTTTCA TGTGACGATT ACCTGGTTCC TGGCTACTAT  AGAGACTCAT GCCCCCTTGT GGAGGACATT GTGAGAAGAC ATGTCCTCAT GGCTATACGC AAAGATCCTC GCATGGCTGC ATCGCTACTT CGACTCCACT TTCATGATTG CTTCGTCATG  GGGTGTGATG GATCGGTGTT ACTAGACAGC AGAGGGAGCA TAGAGAGTGA GAAGGGGGCC GATCCCAACG TTAATTCAGT CAAAGGATTC GAGGTGGTGG ATTCTATCAA ATTTGCATTG  GAGATTGCAT GCCCAGCTAT TGTTTCTTGT GCCGATATCT TGGCCATGGC TGCTCGCGAC TCCGTCGTCC TGAGAGGAGG GCCCAATTGG GATGTATACT TGGGGAGAAG GGATTCTCTA  ACTGCAAGCT TCAGTGGCGC TAATAAATTC ATCCCATTAC CGAATTCCAC CCTCCAAACT CTCATCACCA ACTTCCAAGC TCAAGGTCTG GACCCTCTAG ATCTAGTAAC ACTATCCGGG  AGCCATACAA TTGGCTACTC AAGGTGCTTG AACTTTAGAC AACATATCTA TTCCCCACTA GAACAAGATG AAGAAGAATA TGCAGAAGGA AGCACGCCAG ACTACTGTTC TCAACAAAAA  AAGAGAAAAA GCAAGCCAGA CCCTGTCTTT CGAAGAATTT TGCGCTCGAC ATGCCCGATT ACAGGGAGGG ACAACAGTCT AACGCCATTA GACTATTCAA CTTCGGTTTT CTTTGACAAT  CATTACTTCC TGAACCTCAT GCAAGGGAAG GCTCTTTTAC AGTCTGATAG CTCCCTCCTC TCTTCAACGT ACACAAAGGA GCTAGTGTGG GCCTATGCAT CGAACCCACG CCTCTTTTAC 
AGAAAGTTTG CATCATCCAT GGTGAAGATG GGAAACATCA ACCCTCTCAT TGGAGACCAG GGAGAGATAC GACAAAATTG TCGATTCGTG AACTCGCAGA GTTTGACGAG CCCATAG 

Retrieve as FASTA