Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
361 |
PWM (Da): |
39225.36 |
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PI (pH): |
4.72 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MEVRGEGVEA LLGYDEYRVG EEREEGGFLN YADYTAGEER ESMREESLLS YDYYKNSCPQ AESIIRDTVS ELTRNRSNVP AVLLRLAFHD CFVEGCEASV LLDEVVDGGP SEKEARPNKG
SLKGFDLIDM IKSNLQNSCP ATVSCADIIV LSARDAIALA GGPFYPLKMG RKDGFKSHFE RAEAELPRPS DHLNTTLSRF MAKGFSLIDT ISLLGGHSIG KTSCRFINDR LFNMSGGGLP
DPTLPLDLLP SLRIACDPAN GISHAATGIS DPQVPLHLEA TNNQAFDATH FYANLAWGRG VLFSDQQLMS SPITAAIVRQ YASGERSFDS DFGAAMIKLS NLGLLSGGAG EVRTHCAYFN
I*
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Retrieve as FASTA
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Remarks |
Incorrect prediction from Phytozome. Two ORf were predicted: AmTr_v1.0_scaffold00064.17 (exons 1 and 2) and AmTr_v1.0_scaffold00064.16 ( exons 2 and 4). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAAGTGA GAGGAGAGGG AGTGGAGGCT CTGTTGGGGT ATGATGAATA CAGGGTTGGG GAGGAGAGAG AGGAGGGAGG ATTTCTCAAC TATGCAGATT ACACAGCTGG GGAGGAGAGA
GAAAGTATGA GAGAGGAATC TCTGTTGAGC TATGACTACT ACAAGAATTC ATGCCCTCAA GCTGAATCCA TCATCCGCGA CACTGTTAGC GAGCTCACTC GAAACCGATC CAATGTCCCT
GCTGTTCTCT TGCGCCTTGC CTTCCATGAC TGCTTTGTTG AGGTCTCTCT GCCCCCCTCT TGTTTCTTTG AATTTGATTG CATTGACATG TGGTGGTTTT CTCTCTCCTC TTGTTTCTTT
GAATTTGCTC GCAGCTTTCA TGGGGTAGCT CTCTCTCTCT CTCTCGTTGT TTCATTGGAT TTCTTGCATA TTTCATGGAG TAATTTTCTC TCTCTTCTTA GTTTCTTGGC CCACTACATG
GCATTTCAGA TGTTCTTTCA GAGTTAAGCG TGTCTGCAAT TCCTTTTTCT TTTTCCAATT TTTTTTTGTT GTAATCTACA GTCTTGAATC ATTTATTGGA ACTTTTATCA TCTTTTTAGA
GAGAGAAAGA GAGGTTTTAA TGGATTTTTT GTTGCAGGGG TGTGAGGCAT CGGTTCTGCT TGATGAGGTA GTGGATGGTG GGCCCTCGGA GAAAGAAGCG CGTCCGAACA AAGGCTCACT
CAAGGGCTTC GATTTGATAG ACATGATCAA GTCCAACCTC CAAAACTCCT GCCCTGCTAC TGTTTCATGC GCCGATATCA TTGTCCTCAG TGCCAGAGAC GCCATTGCCC TGGTCACTTT
CTCTCTCTAA CTCTCTATCT CTCTCTACTG ATTCTATCTT TGAGGGCTTA CTTCTCTCTC TAAATTTACT CTCTCTCGCT CTCTCTCAAT TGATTGTATC TTTGAGGACT TCGCTATAGA
ATCTCTATCT TTGAGGGCTT CTCTCTCTCT CTAAAATACC AAATGTTCGA TTTATACGAG GAATTTAGAA AGGTCTGTCG ACTTACGTTT TTTTTTTTCT TTTAAAATTA CCTTTTAGTC
AATCCGAATT TTGATTTTAT TTTATTGTTT TTAGATTTTT CCGGCGAGTG CTTGGGGCAT GATACTAATG AAAATTTTAA AAAAATTTTT TAAAAAAATT AAAATTTGGG TTGACGTGAG
AATAATTTTG AAAAAAATAA AAAATATGGA TTAACCGACT TTTTGTAATT TTGCCTATAA ATAGAAGATT TTGTATTTTA TCTAAAATTT TAGGATCTGT ATGTAAATCA CTGAAATTTT
TATTTTAAAT TATTTTATTG TTTTTTTATA TGTTTATGTG TATATAAATA TATATAAACA TGAAATTTAT TTATATAAAA TTTAAAAAAA TTCAAAGCTT CCCTGAATCT TCGGAGTTAT
CGAATTGGTT CAGGCCAAGA CTCCAAAGCG AATATTGACA ACATTACTTT GGAGATTTCT CTCTCTCAAA TGGCTCCGAA GCTAATATTG ACAACATTAC TACGGGATTT CTCTCTCTCA
AATGGTGAAT GGGTTTGTGT GTGTGAATTG CAGGCTGGAG GACCGTTCTA TCCGCTGAAG ATGGGGAGGA AAGACGGCTT CAAATCCCAT TTTGAGAGAG CAGAGGCGGA GCTCCCCAGG
CCTTCCGACC ATCTCAACAC CACTCTCTCT CGTTTCATGG CCAAGGGTTT CTCTCTCATC GACACTATCA GCCTTCTTGG TACATTACTC TCTCTCTCTT CTGAATAGAA ACATGAGAAT
CTCTCTCTCT TGATCAGTAA CATGAGCATC TCTCTCTCTA AAACCACAGG GGGCCACAGC ATCGGGAAGA CGAGCTGCCG CTTCATCAAC GACCGGCTCT TCAACATGAG CGGCGGCGGC
CTCCCCGACC CTACGCTCCC CCTCGACCTC CTCCCTTCGC TCAGGATTGC CTGTGACCCT GCCAATGGCA TAAGCCACGC CGCCACTGGT ATAAGTGACC CTCAGGTCCC CTTGCACCTG
GAAGCCACCA ACAACCAAGC CTTCGACGCC ACCCACTTCT ACGCCAACTT GGCCTGGGGC AGGGGCGTCC TTTTCTCTGA TCAGCAGCTC ATGTCCTCCC CCATCACCGC CGCCATTGTG
AGGCAGTACG CGAGTGGGGA GAGGTCCTTC GACTCCGACT TCGGTGCCGC CATGATAAAG CTCTCCAACT TGGGCCTTCT CTCTGGCGGC GCCGGCGAAG TTCGAACCCA CTGCGCTTAC
TTCAACATTT AG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAAGTGA GAGGAGAGGG AGTGGAGGCT CTGTTGGGGT ATGATGAATA CAGGGTTGGG GAGGAGAGAG AGGAGGGAGG ATTTCTCAAC TATGCAGATT ACACAGCTGG GGAGGAGAGA
GAAAGTATGA GAGAGGAATC TCTGTTGAGC TATGACTACT ACAAGAATTC ATGCCCTCAA GCTGAATCCA TCATCCGCGA CACTGTTAGC GAGCTCACTC GAAACCGATC CAATGTCCCT
GCTGTTCTCT TGCGCCTTGC CTTCCATGAC TGCTTTGTTG AGGGGTGTGA GGCATCGGTT CTGCTTGATG AGGTAGTGGA TGGTGGGCCC TCGGAGAAAG AAGCGCGTCC GAACAAAGGC
TCACTCAAGG GCTTCGATTT GATAGACATG ATCAAGTCCA ACCTCCAAAA CTCCTGCCCT GCTACTGTTT CATGCGCCGA TATCATTGTC CTCAGTGCCA GAGACGCCAT TGCCCTGGCT
GGAGGACCGT TCTATCCGCT GAAGATGGGG AGGAAAGACG GCTTCAAATC CCATTTTGAG AGAGCAGAGG CGGAGCTCCC CAGGCCTTCC GACCATCTCA ACACCACTCT CTCTCGTTTC
ATGGCCAAGG GTTTCTCTCT CATCGACACT ATCAGCCTTC TTGGGGGCCA CAGCATCGGG AAGACGAGCT GCCGCTTCAT CAACGACCGG CTCTTCAACA TGAGCGGCGG CGGCCTCCCC
GACCCTACGC TCCCCCTCGA CCTCCTCCCT TCGCTCAGGA TTGCCTGTGA CCCTGCCAAT GGCATAAGCC ACGCCGCCAC TGGTATAAGT GACCCTCAGG TCCCCTTGCA CCTGGAAGCC
ACCAACAACC AAGCCTTCGA CGCCACCCAC TTCTACGCCA ACTTGGCCTG GGGCAGGGGC GTCCTTTTCT CTGATCAGCA GCTCATGTCC TCCCCCATCA CCGCCGCCAT TGTGAGGCAG
TACGCGAGTG GGGAGAGGTC CTTCGACTCC GACTTCGGTG CCGCCATGAT AAAGCTCTCC AACTTGGGCC TTCTCTCTGG CGGCGCCGGC GAAGTTCGAA CCCACTGCGC TTACTTCAAC
ATTTAG
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Retrieve as FASTA
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