Entry information : AtrPrx65(AmTr_v1.0_scaffold00064.17 / AmTr_v1.0_scaffold00064.16)
Entry ID 16650
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-13 (Christophe Dunand)
Peroxidase information: AtrPrx65(AmTr_v1.0_scaffold00064.17 / AmTr_v1.0_scaffold00064.16)
Name AtrPrx65(AmTr_v1.0_scaffold00064.17 / AmTr_v1.0_scaffold00064.16)
Class Class III peroxidase    [Orthogroup: Prx023]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx65
start..stop
S start..stop
EferPrx113 299 5e-100 49..358 60..363
AfpPrx02 291 1e-97 46..357 8..310
PtPrx36 293 2e-97 28..358 51..380
AcoPrx05 291 5e-97 46..357 62..364
Literature and cross-references AtrPrx65(AmTr_v1.0_scaffold00064.17 / AmTr_v1.0_scaffold00064.16)
Protein sequence: AtrPrx65(AmTr_v1.0_scaffold00064.17 / AmTr_v1.0_scaffold00064.16)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   361
PWM (Da):   %s   39225.36  
PI (pH):   %s   4.72
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEVRGEGVEA LLGYDEYRVG EEREEGGFLN YADYTAGEER ESMREESLLS YDYYKNSCPQ AESIIRDTVS ELTRNRSNVP AVLLRLAFHD CFVEGCEASV LLDEVVDGGP SEKEARPNKG  SLKGFDLIDM IKSNLQNSCP ATVSCADIIV LSARDAIALA GGPFYPLKMG RKDGFKSHFE RAEAELPRPS DHLNTTLSRF MAKGFSLIDT ISLLGGHSIG KTSCRFINDR LFNMSGGGLP  DPTLPLDLLP SLRIACDPAN GISHAATGIS DPQVPLHLEA TNNQAFDATH FYANLAWGRG VLFSDQQLMS SPITAAIVRQ YASGERSFDS DFGAAMIKLS NLGLLSGGAG EVRTHCAYFN 
I* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome. Two ORf were predicted: AmTr_v1.0_scaffold00064.17 (exons 1 and 2) and AmTr_v1.0_scaffold00064.16 ( exons 2 and 4).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAAGTGA GAGGAGAGGG AGTGGAGGCT CTGTTGGGGT ATGATGAATA CAGGGTTGGG GAGGAGAGAG AGGAGGGAGG ATTTCTCAAC TATGCAGATT ACACAGCTGG GGAGGAGAGA  GAAAGTATGA GAGAGGAATC TCTGTTGAGC TATGACTACT ACAAGAATTC ATGCCCTCAA GCTGAATCCA TCATCCGCGA CACTGTTAGC GAGCTCACTC GAAACCGATC CAATGTCCCT  GCTGTTCTCT TGCGCCTTGC CTTCCATGAC TGCTTTGTTG AGGTCTCTCT GCCCCCCTCT TGTTTCTTTG AATTTGATTG CATTGACATG TGGTGGTTTT CTCTCTCCTC TTGTTTCTTT  GAATTTGCTC GCAGCTTTCA TGGGGTAGCT CTCTCTCTCT CTCTCGTTGT TTCATTGGAT TTCTTGCATA TTTCATGGAG TAATTTTCTC TCTCTTCTTA GTTTCTTGGC CCACTACATG  GCATTTCAGA TGTTCTTTCA GAGTTAAGCG TGTCTGCAAT TCCTTTTTCT TTTTCCAATT TTTTTTTGTT GTAATCTACA GTCTTGAATC ATTTATTGGA ACTTTTATCA TCTTTTTAGA  GAGAGAAAGA GAGGTTTTAA TGGATTTTTT GTTGCAGGGG TGTGAGGCAT CGGTTCTGCT TGATGAGGTA GTGGATGGTG GGCCCTCGGA GAAAGAAGCG CGTCCGAACA AAGGCTCACT  CAAGGGCTTC GATTTGATAG ACATGATCAA GTCCAACCTC CAAAACTCCT GCCCTGCTAC TGTTTCATGC GCCGATATCA TTGTCCTCAG TGCCAGAGAC GCCATTGCCC TGGTCACTTT  CTCTCTCTAA CTCTCTATCT CTCTCTACTG ATTCTATCTT TGAGGGCTTA CTTCTCTCTC TAAATTTACT CTCTCTCGCT CTCTCTCAAT TGATTGTATC TTTGAGGACT TCGCTATAGA  ATCTCTATCT TTGAGGGCTT CTCTCTCTCT CTAAAATACC AAATGTTCGA TTTATACGAG GAATTTAGAA AGGTCTGTCG ACTTACGTTT TTTTTTTTCT TTTAAAATTA CCTTTTAGTC  AATCCGAATT TTGATTTTAT TTTATTGTTT TTAGATTTTT CCGGCGAGTG CTTGGGGCAT GATACTAATG AAAATTTTAA AAAAATTTTT TAAAAAAATT AAAATTTGGG TTGACGTGAG  AATAATTTTG AAAAAAATAA AAAATATGGA TTAACCGACT TTTTGTAATT TTGCCTATAA ATAGAAGATT TTGTATTTTA TCTAAAATTT TAGGATCTGT ATGTAAATCA CTGAAATTTT  TATTTTAAAT TATTTTATTG TTTTTTTATA TGTTTATGTG TATATAAATA TATATAAACA TGAAATTTAT TTATATAAAA TTTAAAAAAA TTCAAAGCTT CCCTGAATCT TCGGAGTTAT  CGAATTGGTT CAGGCCAAGA CTCCAAAGCG AATATTGACA ACATTACTTT GGAGATTTCT CTCTCTCAAA TGGCTCCGAA GCTAATATTG ACAACATTAC TACGGGATTT CTCTCTCTCA  AATGGTGAAT GGGTTTGTGT GTGTGAATTG CAGGCTGGAG GACCGTTCTA TCCGCTGAAG ATGGGGAGGA AAGACGGCTT CAAATCCCAT TTTGAGAGAG CAGAGGCGGA GCTCCCCAGG  CCTTCCGACC ATCTCAACAC CACTCTCTCT CGTTTCATGG CCAAGGGTTT CTCTCTCATC GACACTATCA GCCTTCTTGG TACATTACTC TCTCTCTCTT CTGAATAGAA ACATGAGAAT  CTCTCTCTCT TGATCAGTAA CATGAGCATC TCTCTCTCTA AAACCACAGG GGGCCACAGC ATCGGGAAGA CGAGCTGCCG CTTCATCAAC GACCGGCTCT TCAACATGAG CGGCGGCGGC  CTCCCCGACC CTACGCTCCC CCTCGACCTC CTCCCTTCGC TCAGGATTGC CTGTGACCCT GCCAATGGCA TAAGCCACGC CGCCACTGGT ATAAGTGACC CTCAGGTCCC CTTGCACCTG  GAAGCCACCA ACAACCAAGC CTTCGACGCC ACCCACTTCT ACGCCAACTT GGCCTGGGGC AGGGGCGTCC TTTTCTCTGA TCAGCAGCTC ATGTCCTCCC CCATCACCGC CGCCATTGTG  AGGCAGTACG CGAGTGGGGA GAGGTCCTTC GACTCCGACT TCGGTGCCGC CATGATAAAG CTCTCCAACT TGGGCCTTCT CTCTGGCGGC GCCGGCGAAG TTCGAACCCA CTGCGCTTAC 
TTCAACATTT AG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAAGTGA GAGGAGAGGG AGTGGAGGCT CTGTTGGGGT ATGATGAATA CAGGGTTGGG GAGGAGAGAG AGGAGGGAGG ATTTCTCAAC TATGCAGATT ACACAGCTGG GGAGGAGAGA  GAAAGTATGA GAGAGGAATC TCTGTTGAGC TATGACTACT ACAAGAATTC ATGCCCTCAA GCTGAATCCA TCATCCGCGA CACTGTTAGC GAGCTCACTC GAAACCGATC CAATGTCCCT  GCTGTTCTCT TGCGCCTTGC CTTCCATGAC TGCTTTGTTG AGGGGTGTGA GGCATCGGTT CTGCTTGATG AGGTAGTGGA TGGTGGGCCC TCGGAGAAAG AAGCGCGTCC GAACAAAGGC  TCACTCAAGG GCTTCGATTT GATAGACATG ATCAAGTCCA ACCTCCAAAA CTCCTGCCCT GCTACTGTTT CATGCGCCGA TATCATTGTC CTCAGTGCCA GAGACGCCAT TGCCCTGGCT  GGAGGACCGT TCTATCCGCT GAAGATGGGG AGGAAAGACG GCTTCAAATC CCATTTTGAG AGAGCAGAGG CGGAGCTCCC CAGGCCTTCC GACCATCTCA ACACCACTCT CTCTCGTTTC  ATGGCCAAGG GTTTCTCTCT CATCGACACT ATCAGCCTTC TTGGGGGCCA CAGCATCGGG AAGACGAGCT GCCGCTTCAT CAACGACCGG CTCTTCAACA TGAGCGGCGG CGGCCTCCCC  GACCCTACGC TCCCCCTCGA CCTCCTCCCT TCGCTCAGGA TTGCCTGTGA CCCTGCCAAT GGCATAAGCC ACGCCGCCAC TGGTATAAGT GACCCTCAGG TCCCCTTGCA CCTGGAAGCC  ACCAACAACC AAGCCTTCGA CGCCACCCAC TTCTACGCCA ACTTGGCCTG GGGCAGGGGC GTCCTTTTCT CTGATCAGCA GCTCATGTCC TCCCCCATCA CCGCCGCCAT TGTGAGGCAG  TACGCGAGTG GGGAGAGGTC CTTCGACTCC GACTTCGGTG CCGCCATGAT AAAGCTCTCC AACTTGGGCC TTCTCTCTGG CGGCGCCGGC GAAGTTCGAA CCCACTGCGC TTACTTCAAC 
ATTTAG 

Retrieve as FASTA