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Entry information : AtrPrx66(AmTr_v1.0_scaffold00029.223)
Entry ID 16651
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx66(AmTr_v1.0_scaffold00029.223)
Name AtrPrx66(AmTr_v1.0_scaffold00029.223)
Class Class III peroxidase     [Orthogroup: Prx008]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx66
start..stop		 S start..stop
AtrPrx30 271 4.88e-93 1..142 1..142
AtrPrx45 251 6.2e-85 1..142 1..139
AtrPrx28 244 2.03e-82 1..142 1..139
AtrPrx60 239 3.08e-80 1..142 1..139
Literature and cross-references AtrPrx66(AmTr_v1.0_scaffold00029.223)
Protein sequence: AtrPrx66(AmTr_v1.0_scaffold00029.223)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   156 (127)
PWM (Da):   %s   16453.15 (13407.7) Transmb domain:   %s   o4-26i
PI (pH):   %s   6.49 (6.90) Peptide Signal:   %s   cut: 30 range:30-156
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSISGAYIT TLLMILLCSG SSMLLLCEGQ QLSSNFYDST CPNALSTIRT AIRTAISAER RMGASLIRLH FHDCFVNGCD ASLLLDSTSS FESEQNAIQN IGSARGFHVI ENAKSKVESV 
CPGVVSCADI LAVAARDSSV AVSIRNTPLH SSTISS* 

Retrieve as FASTA  
Remarks Only exons 1 and 2 due to N in the sequence. AmTr_v1.0_scaffold00029.224 only contains exon 4, and the two ORF are separed by 16000 undetermined nucleotides
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCTA TCTCTGGTGC CTACATTACA ACATTGTTGA TGATACTGTT ATGTAGCGGT AGTAGCATGC TGTTACTATG TGAAGGGCAG CAGCTGAGCT CCAACTTCTA TGATTCCACC  TGCCCCAACG CCCTCTCTAC CATCCGCACT GCCATTCGCA CTGCGATTTC GGCGGAGAGG CGCATGGGAG CCTCCCTTAT TCGTCTCCAC TTCCATGATT GCTTTGTCAA TGGGTGCGAT  GCATCGCTGT TGTTGGACTC CACTTCCTCT TTCGAGAGCG AACAGAATGC CATTCAGAAC ATTGGCTCTG CTAGAGGCTT CCATGTCATT GAAAACGCAA AGTCGAAAGT GGAAAGCGTA 
TGCCCCGGCG TGGTCTCCTG CGCCGACATC CTTGCAGTTG CGGCAAGAGA CTCTTCTGTG GCTGTGAGCA TACGAAACAC ACCACTTCAT TCATCAACAA TTTCCTCTTA A 

Retrieve as FASTA