Entry information : AtrPrx67(AmTr_v1.0_scaffold00077.3)
Entry ID 16652
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx67(AmTr_v1.0_scaffold00077.3)
Name AtrPrx67(AmTr_v1.0_scaffold00077.3)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx67
start..stop
S start..stop
AtrPrx57 536 0 1..313 1..313
AtrPrx69 528 0 1..313 1..317
GrPrx38 488 7e-176 6..313 14..323
VvPrx35 488 7e-176 8..313 19..326
Literature and cross-references AtrPrx67(AmTr_v1.0_scaffold00077.3)
Protein sequence: AtrPrx67(AmTr_v1.0_scaffold00077.3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   313
PWM (Da):   %s   32640.03  
PI (pH):   %s   7.36
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFSLFGLAM TFLSLLAASS AQLSANFYSS SCPKALSTIQ TAVQAAVKKE ARMGASLLRL HFHDCFGCDG SILLDDNSTF TGEKTAGPNA NSVRGYDVVD NIKSNVEAAC PGVVSCADIL  AVSARDSVVA LGGPTWTVLL GRRDSTTASL STANSDIPAP SLSLSGLITS FSNKGLSSSE MVALSGSHTI GQARCTTFRT HIYNETNIDS TYATSLKSNC PFSGGDNNLS PLDVTSPTVF 
DNAYYKNLVN KKGLLHSDQE LFNGGSTDSQ VTGYTSSSST FPTDFAKAMV KMGNISPLTG SSGQVRTNCR KVN 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (only exons 1 and 2 were predicted). Exons 3 and 4 were iincluded in scaffold00077.2 (61415 nt)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTCT CTCTCTTTGG CTTGGCCATG ACCTTCCTCT CTCTCTTAGC AGCTTCTTCT GCTCAACTCT CTGCAAACTT TTACTCTTCT TCATGTCCCA AAGCACTCTC CACTATTCAA  ACCGCAGTGC AAGCTGCCGT GAAGAAGGAA GCTCGCATGG GGGCCTCCTT ACTTCGTCTG CATTTCCATG ACTGCTTTGG TTGTGATGGG TCTATATTAT TGGATGACAA CTCCACCTTC  ACCGGAGAGA AAACTGCGGG GCCAAATGCA AACTCAGTGA GAGGTTACGA TGTGGTCGAC AACATCAAAT CCAATGTAGA AGCTGCATGC CCCGGTGTGG TCTCCTGTGC AGACATCCTA  GCCGTCTCAG CACGTGACTC GGTTGTCGCT CTTGGTGGAC CAACATGGAC GGTGCTATTA GGGAGAAGAG ATTCAACAAC TGCTAGTCTA AGTACTGCAA ACTCCGATAT CCCTGCACCT  TCCTTAAGTC TGAGTGGTCT CATCACAAGC TTCTCGAATA AAGGGCTCAG TAGCAGCGAA ATGGTAGCTC TTTCAGGATC ACACACAATT GGCCAAGCTC GGTGCACCAC TTTTAGGACT  CACATCTACA ACGAGACTAA CATAGACTCA ACCTATGCTA CCTCATTGAA ATCAAATTGC CCCTTCAGTG GAGGTGACAA TAACCTCTCT CCACTTGATG TAACATCTCC AACTGTCTTT  GACAATGCCT ACTACAAGAA CTTGGTGAAC AAAAAGGGGC TCCTCCACTC TGATCAAGAA CTCTTCAATG GAGGCTCCAC TGACTCTCAA GTCACTGGCT ACACTTCCTC TTCTTCAACT 
TTCCCCACAG ATTTTGCCAA GGCAATGGTG AAAATGGGAA ACATTAGTCC TCTAACTGGC TCTAGTGGGC AAGTCAGGAC GAACTGTAGG AAGGTCAACT AG 

Retrieve as FASTA