Entry information : AtrPrx69(AmTr_v1.0_scaffold00077.4)
Entry ID 16654
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx69(AmTr_v1.0_scaffold00077.4)
Name AtrPrx69(AmTr_v1.0_scaffold00077.4)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx69
start..stop
S start..stop
AtrPrx67 528 0 1..317 1..313
AtrPrx57 509 0 1..317 1..313
GrPrx38 468 7e-168 10..317 16..323
VvPrx35 463 4e-166 8..317 17..326
Literature and cross-references AtrPrx69(AmTr_v1.0_scaffold00077.4)
Protein sequence: AtrPrx69(AmTr_v1.0_scaffold00077.4)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317
PWM (Da):   %s   33257.22  
PI (pH):   %s   6.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFFVSVLGF AMVFLPLFAA SSADLSSTFY SSSCPKALYT IQTAVKAAVK KEARMGASLL RLHFHDCFVN GCDGSILLDD NSTFTGEKTA TGNVNSVRGF DVVDDIKSKV EAVCPGVVSC  ADILAVAARD SVVCFGGPTW TVLLGRRDST TASLSAANSN IPSPTSSLSN LITSFSNQGL SRSEMVALSG SHTIGQARCT SFRAHIYNET NIESTFSTSL QSDCPFSGGD DNLSPLDASS 
ATVFDSGYYK NLVNKKGLLH SDQELFNGGS TDSQVNGYTT SSSTFFKDFA SAMVKMGNIS PLTGTSGEVR TKCGKVN 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (Exons 1 and 2 were missing). Included in scaffold00077.2 (61415 nt)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTCT TTGTCTCTGT CCTTGGTTTT GCCATGGTCT TCCTCCCTCT CTTTGCAGCT TCCTCTGCTG ATCTTTCTTC AACTTTTTAC TCGTCTTCGT GTCCAAAAGC CCTCTACACC  ATTCAAACCG CAGTGAAAGC TGCAGTTAAG AAGGAAGCTC GCATGGGCGC CTCCTTACTT CGCTTGCATT TCCATGATTG TTTTGTCAAT GGCTGCGATG GGTCTATACT ATTGGATGAC  AACTCCACCT TCACAGGGGA GAAAACTGCA ACGGGAAACG TAAATTCAGT GAGAGGTTTC GATGTGGTCG ACGACATCAA ATCGAAAGTG GAAGCTGTCT GCCCTGGCGT CGTCTCCTGT  GCCGATATCT TGGCCGTAGC AGCACGTGAC TCTGTTGTTT GCTTTGGTGG GCCAACATGG ACTGTGTTAT TAGGGAGGAG AGATTCAACA ACTGCTAGTC TAAGTGCAGC CAACTCAAAC  ATTCCTTCAC CTACCTCAAG TCTCAGTAAT CTCATCACCA GTTTCTCAAA CCAGGGGCTA AGCCGCAGCG AGATGGTCGC TCTTTCAGGT TCTCACACAA TTGGTCAAGC TCGGTGCACT  AGTTTCAGGG CTCACATTTA CAATGAGACC AACATAGAGT CAACCTTCTC TACATCTTTG CAATCCGACT GCCCATTCAG TGGAGGTGAT GACAACCTTT CTCCTCTTGA TGCATCATCA  GCAACTGTAT TTGACAGTGG ATATTACAAG AACTTGGTGA ACAAGAAGGG TCTTCTCCAT TCTGATCAAG AGCTTTTCAA TGGAGGCTCA ACTGATTCTC AAGTCAATGG TTACACCACC 
TCATCTTCAA CTTTCTTCAA GGACTTTGCC AGTGCCATGG TGAAGATGGG AAACATAAGT CCCCTCACAG GCACTAGTGG GGAAGTTAGG ACCAAATGTG GAAAGGTTAA TTAG 

Retrieve as FASTA