Entry information : AtrPrx70(AmTr_v1.0_scaffold00029.224)
Entry ID 16655
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx70(AmTr_v1.0_scaffold00029.224)
Name AtrPrx70(AmTr_v1.0_scaffold00029.224)
Class Class III peroxidase     [Orthogroup: Prx011]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx70
start..stop
S start..stop
AtrPrx30 275 7e-95 1..133 192..324
AtrPrx[P]87 263 2e-90 1..133 173..305
AtrPrx28 261 2e-89 1..133 189..321
AtrPrx[P]75 260 4e-89 1..133 196..328
Literature and cross-references AtrPrx70(AmTr_v1.0_scaffold00029.224)
Protein sequence: AtrPrx70(AmTr_v1.0_scaffold00029.224)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   133
PWM (Da):   %s   14457.05  
PI (pH):   %s   8.48
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVALSGAHTI GQAQCFTFRD RIYNHTNIDA SFARKRRGNC PSNGGDSNLA ALDLVTPTSF DNNYFKILMQ KKGLLESDQV LFNGGSTDDI VRSYSNSRSA FYSDFAAAMV KMGDIEPLTG 
SAGQIRARCS VPN* 

Retrieve as FASTA  
Remarks Partial sequence (only last exon). AmTr_v1.0_scaffold00029.223 only contains exons 1 and 2, and the two ORF are separed by 16000 undetermined nucleotides
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTTGCTC TCTCCGGTGC ACACACAATA GGCCAAGCCC AGTGCTTCAC ATTCAGAGAC AGAATTTACA ACCACACCAA CATCGACGCC AGCTTTGCTC GCAAAAGGCG TGGCAACTGC  CCTTCAAATG GAGGGGACTC CAACCTCGCA GCTCTTGACC TTGTTACACC CACCAGCTTC GACAACAACT ACTTCAAGAT TTTGATGCAG AAAAAGGGTT TGTTGGAATC AGATCAGGTG  TTGTTTAATG GTGGATCAAC TGATGACATA GTGAGGTCTT ATAGTAATAG TCGAAGTGCC TTCTACTCGG ACTTTGCGGC AGCTATGGTG AAGATGGGGG ACATTGAACC TCTTACTGGA 
TCAGCAGGGC AGATCAGGGC CAGGTGCTCA GTGCCCAATT GA 

Retrieve as FASTA