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Entry information : MePrx07 (cassava4.1_011142m)
Entry ID 1666
Creation 2005-09-30 (Qiang Li)
Last sequence changes 2011-07-01 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: MePrx07 (cassava4.1_011142m)
Name (synonym) MePrx07 (cassava4.1_011142m)
Class Class III peroxidase    [Orthogroup: Prx150]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducers Pathogen interaction
Pseudomonas syringae infection
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx07
start..stop		 S start..stop
HbPrx01 434 9.24e-154 3..330 2..333
PnPrx01 419 5.45e-148 10..342 7..343
PtPrx99 419 7.99e-148 10..342 7..343
PtPrx11_Trichobel 413 2e-145 10..342 7..343
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1666' 'join(7686..7907,8033..8224,8411..8579,8692..9137)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7686..7907 220 N° 2 8033..8224 190 N° 3 8411..8579 167 N° 4 8692..9137 444
join(7686..7907,8033..8224,8411..8579,8692..9137)


exon

Literature and cross-references MePrx07 (cassava4.1_011142m)
Literature Kemp,B.P., Beeching,J.R. and Cooper,R.M. cDNA-AFLP reveals genes differentially expressed during the hypersensitive response of cassava. Mol. Plant Pathol. 6 (2), 113-123 (2005).
DNA ref. Phytozome 12:   scaffold07430 (7686..9137)
Protein sequence: MePrx07 (cassava4.1_011142m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (320)
PWM (Da):   %s   37376.73 (35047.4) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.5 (5.79) Peptide Signal:   %s   cut: 28 range:23-342
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKHPSPLLMIVAGLVSAILVGAQLGYAQLSPTFYDQTCPNVSFIIREVILEAMLTDPRIDASLNRLHFHDCFVNGCDGSLLLDTTPTMEGEKEALGNNNSARGFDVVDTMKARLESACPG
VVSCADILTIASQESVTLAGGPTWTNLLGRRDSFNASRAQANLSLPSPFMTLEELIVNFRNVGLPNVTDLVALSGAHTFGQAQCRTFRTRIYDSPELPLNSTYNVTLSRICSRNGTTDAN
SRTQLDATTPNVFDNQYFSNLQFGRGLLKSDQVLFSTPGSNTTEIVNRFTANRAVFFQSFVDAMIRMGNLRPLTGTEGEIRLNCRRRNGNLAEPGIRMVTSM*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCATCCTTCTCCATTATTGATGATAGTGGCTGGTTTGGTCTCTGCAATTTTGGTCGGAGCGCAGCTGGGCTATGCTCAGCTCTCTCCGACATTTTACGACCAGACTTGCCCAAAT
GTCTCCTTTATCATACGAGAAGTCATCCTGGAGGCCATGCTTACTGATCCCAGGATCGATGCCAGCCTCAACAGGCTTCATTTCCATGACTGCTTCGTTAATATGTAAGTTAATTTTGCA
ACCACACATGTCATGATCTCTAAAGTTGCAAACGGGGATATTTTTGTAATTTTGACTGTTTCTTCTTTCTGAAATTCATTTATGAACGTATGGAATAATATTATAACAGGGCTGTGATGG
ATCACTCTTGTTGGACACTACTCCTACTATGGAGGGTGAGAAAGAAGCTCTTGGTAATAACAACTCAGCAAGAGGTTTCGATGTTGTCGATACAATGAAGGCTAGGTTGGAGAGTGCTTG
TCCTGGAGTTGTTTCTTGCGCTGATATTCTCACCATTGCTTCTCAAGAATCTGTTACTTTGTGGTAATGCATATCACTATTAGCTTTCGACGAGTTTTTAATTATTCTAGTACATCAAAC
TTATTGCAATAAACTTAACAAAAATTATTTAAATATTTGATTTTTCTGTACATTGAATTTAATTTTGGATGGAGCTGGAGCTGACAGGTGCAGTTGAGCGTAGACTAATATAAATGAGAT
TGGTTGCAGGCCGGTGGGCCAACATGGACTAATCTACTTGGAAGAAGAGATAGCTTTAATGCAAGCAGGGCTCAAGCTAATCTTAGCCTTCCAAGTCCCTTTATGACCCTCGAGGAGCTC
ATCGTCAATTTCCGCAACGTTGGCCTCCCTAATGTTACCGACTTAGTTGCCCTCTCCGCGGTGAGCTCATATATTGCTTATTAATTACAAAATATTGCAATCCCTCTAAGTTTTTTACTT
TAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTCAGGCGCTCATACGTTTGGACAAGCTCAATGTCGAACTTTTAGGACTAGAATATACGACTCTCCTGAACTA
CCATTGAACTCAACTTATAATGTAACACTAAGCAGAATATGCTCAAGAAATGGAACGACGGATGCAAATTCGAGAACCCAGCTTGATGCTACAACACCTAATGTGTTCGATAACCAATAT
TTCTCTAATCTTCAATTTGGCAGAGGTCTTCTAAAGAGTGATCAAGTTCTATTTTCGACTCCGGGATCTAATACTACTGAAATCGTTAATAGATTTACTGCTAATCGGGCCGTATTTTTT
CAAAGCTTTGTGGATGCTATGATCAGAATGGGGAATCTCAGGCCTTTAACAGGAACTGAAGGAGAAATTAGATTGAACTGTCGCAGAAGAAATGGCAATTTGGCTGAACCGGGCATTCGT
ATGGTTACTTCTATGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCATCCTTCTCCATTATTGATGATAGTGGCTGGTTTGGTCTCTGCAATTTTGGTCGGAGCGCAGCTGGGCTATGCTCAGCTCTCTCCGACATTTTACGACCAGACTTGCCCAAAT
GTCTCCTTTATCATACGAGAAGTCATCCTGGAGGCCATGCTTACTGATCCCAGGATCGATGCCAGCCTCAACAGGCTTCATTTCCATGACTGCTTCGTTAATGGCTGTGATGGATCACTC
TTGTTGGACACTACTCCTACTATGGAGGGTGAGAAAGAAGCTCTTGGTAATAACAACTCAGCAAGAGGTTTCGATGTTGTCGATACAATGAAGGCTAGGTTGGAGAGTGCTTGTCCTGGA
GTTGTTTCTTGCGCTGATATTCTCACCATTGCTTCTCAAGAATCTGTTACTTTGGCCGGTGGGCCAACATGGACTAATCTACTTGGAAGAAGAGATAGCTTTAATGCAAGCAGGGCTCAA
GCTAATCTTAGCCTTCCAAGTCCCTTTATGACCCTCGAGGAGCTCATCGTCAATTTCCGCAACGTTGGCCTCCCTAATGTTACCGACTTAGTTGCCCTCTCCGGCGCTCATACGTTTGGA
CAAGCTCAATGTCGAACTTTTAGGACTAGAATATACGACTCTCCTGAACTACCATTGAACTCAACTTATAATGTAACACTAAGCAGAATATGCTCAAGAAATGGAACGACGGATGCAAAT
TCGAGAACCCAGCTTGATGCTACAACACCTAATGTGTTCGATAACCAATATTTCTCTAATCTTCAATTTGGCAGAGGTCTTCTAAAGAGTGATCAAGTTCTATTTTCGACTCCGGGATCT
AATACTACTGAAATCGTTAATAGATTTACTGCTAATCGGGCCGTATTTTTTCAAAGCTTTGTGGATGCTATGATCAGAATGGGGAATCTCAGGCCTTTAACAGGAACTGAAGGAGAAATT
AGATTGAACTGTCGCAGAAGAAATGGCAATTTGGCTGAACCGGGCATTCGTATGGTTACTTCTATGTGA

Retrieve as FASTA