Entry information : AtrPrx[P]75(AmTr_v1.0_scaffold00029.219)
Entry ID 16660
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx[P]75(AmTr_v1.0_scaffold00029.219)
Name AtrPrx[P]75(AmTr_v1.0_scaffold00029.219)
Class Class III peroxidase     [Orthogroup: Prx011]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx[P]75
start..stop
S start..stop
AtrPrx30 571 0 6..329 2..325
AtrPrx28 561 0 10..329 5..322
AtrPrx60 554 0 10..329 5..322
AtrPrx45 554 0 10..329 5..322
Literature and cross-references AtrPrx[P]75(AmTr_v1.0_scaffold00029.219)
Protein sequence: AtrPrx[P]75(AmTr_v1.0_scaffold00029.219)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (303)
PWM (Da):   %s   34987.41 (31156.0)  
PI (pH):   %s   8.21 (4.05) Peptide Signal:   %s   cut: 30 range:30-332
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSSSGAITS DAHIATVLMI ALFSSSMMLL CKGEHLSSNF YDSSCPNALS TIRIAIRTAI SAKRRMGASL ICLHFHDCFV NGCDASVLLD STSSFESEQN AIQNVESTRG FKAIENAKLR  VESKCPGVVS CADILAVAAR DASVAMGGPS WTVKLGRRDS ATASKSDAER ELPLFTAPLD VLICLFGRKG LSAKDMVALS GAHTIGQAQC FIFRDRAYNH TNIDSGFAxK RRGRCPLNGG 
DSNLAPLDLV TPTSFDNNYF KILMRKKGLL ESDQVLFNGG STDDIVRSYS NSRSAFYSDF AAAMVKMGDI EPLTGSAGQI RARCSVPN* 

Retrieve as FASTA  
Remarks IIncorrect prediction from Phytozome (exons 3 and 4 were not predicted due to frame shift)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTCTA GCTCTGGCGC CATTACTTCT GATGCCCATA TAGCAACAGT GTTGATGATA GCCTTGTTTA GCAGTAGCAT GATGTTATTG TGTAAGGGGG AACACCTCAG CTCCAACTTC  TATGACTCCT CATGCCCCAA TGCCTTGTCC ACAATTCGGA TTGCCATTCG GACCGCAATA TCGGCAAAGA GGCGCATGGG AGCCTCTCTC ATCTGCCTCC ACTTTCACGA CTGCTTTGTT  AATGCAAGTT CTTTCTCTCT ACCAGCTATG GTCTCTACTG TTTATCTTTG AACTAGCTTT ATGTCAGTTC TAATACAAAT ATAATTTTTA TGTATCTAGG ACTAGTATGA GCTGACAATA  ATATCACATA TTGATTACAA CTTGACATGA ACAAGTGAGG CTAGTTATGA CATTGTTGTC GGCTGACTTA TAGCTGTCAA ACCTAAATTA GACGACTTTT AGTCCCAAAA AAAAATAAAA  ATTACATGGG TATGGGTACA TGTAGTAAGG TGTCCCTCAA TTTATCTATC TCATTCCATA CGTTTTTAAG TGCTTAAAAA TGCGGTGATG TTATATCCCT ATGCATGTTT ATGTGCATGT  GCAGGGGTGT GACGCATCGG TGCTCTTGGA CTCGACTTCA TCTTTCGAGA GCGAGCAGAA TGCAATTCAG AATGTGGAAT CTACTAGGGG ATTCAAAGCA ATTGAAAATG CCAAGTTGCG  AGTCGAAAGC AAGTGCCCTG GAGTGGTCTC TTGCGCAGAT ATCCTCGCAG TTGCAGCTAG AGATGCTTCT GTCGCTGTCC TTGGGCTATA CTTTCCTCTT AAAGCTCTTT TTTACAATAG  TTAGTTTGTA GAGTATCTTA TTTTAGAAAA AAAAAGAGCC GAGCAAATAC TTGAATACCT TAATAGTTCA TGGATGTGGT CTAGAAATTC AAATATCAAG AACTTGTCAA TTCTTTCAAA  TTACTCACCT CCCTTGCTTT TAAAAGTGTT CAAAACATGC TTATGAAATC TTGCCAACAA ACGATGAAGG CTATTGATTT GAACAAATCA TAAGCATTGA GCATTTTATT CTAATATTTG  AAGCTTTTAG ACCAGCTTAC ATGATCTATG CTGATGTTCA GGTTCTTAGC TAACGATTTT CCTTTCACTT TCTACAGTTG TGATTTCGTC CTACGCATAG ATCTCAATAA CTTTTAGAAT  TTCACGTTTT GATTTCCTTA AAATGAAGAA CAGTTGTAGA GACTAAAAAC TGATAAGGAA ATGAATCTCG CTGAAGATGG GAGGTCCATC TTGGACAGTG AAACTAGGGC GAAGAGACTC  TGCAACCGCA AGCAAGAGTG ATGCGGAGAG AGAACTCCCT CTATTCACTG CTCCCTTGGA TGTCCTCATC TGTCTTTTCG GCAGAAAGGG ACTCAGTGCC AAAGACATGG TGGCTCTCTC  TGGTGCACAC ACCATAGGCC AAGCCCAGTG CTTCATATTC AGAGACAGAG CATACAACCA CACCAACATC GACTCCGGCT TTGCTAGCAA AAAGACGTGG TCGCTGCCCT TTAAATGGCG  GGGACTCGAA CCTCGCACCT CTCGACCTTG TTACTCCCAC CAGCTTTGAC AACAACTACT TCAAGATTTT GATGCGGAAG AAGGGTTTGC TGGAATCAGA TCAAGTGTTG TTTAATGGTG  GATCAACTGA TGACATAGTG AGGTCTTATA GTAACAGTCG AAGCGCCTTC TACTCGGACT TTGCGGCGGC TATGGTGAAG ATGGGGGACA TTGAACCTCT TACTGGATCA GCAGGGCAGA 
TCAGGGCAAG GTGCTCAGTG CCCAATTGA 

Retrieve as FASTA