Entry information : AtrPrx76(AmTr_v1.0_scaffold00077.1 / AmTr_v1.0_scaffold00711.1)
Entry ID 16661
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx76(AmTr_v1.0_scaffold00077.1 / AmTr_v1.0_scaffold00711.1)
Name AtrPrx76(AmTr_v1.0_scaffold00077.1 / AmTr_v1.0_scaffold00711.1)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx76
start..stop
S start..stop
LuPrx64 190 1e-61 1..133 1..133
LuPrx168 187 2e-60 1..133 1..133
PpePrx43 185 1e-59 7..134 8..135
StPrx33 184 2e-59 1..135 1..136
Literature and cross-references AtrPrx76(AmTr_v1.0_scaffold00077.1 / AmTr_v1.0_scaffold00711.1)
Protein sequence: AtrPrx76(AmTr_v1.0_scaffold00077.1 / AmTr_v1.0_scaffold00711.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   135
PWM (Da):   %s   14135.98  
PI (pH):   %s   6.22
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASPHSLCTI FLLTLAFIAC ASGQLSPGFY NGVCPQALPT IQRIVRDAVR NEARMGASLL RLHFHDCFVN GCDGSILLDD TSTFTGEKTS RANANSARGF EVIDSIKTAV DQACGGSVVS 
CADILAVAAR DSVYA 

Retrieve as FASTA  
Remarks Scaffold border only exons 1 and 2
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCGC CTCACTCTCT CTGTACTATC TTCCTTTTGA CACTAGCATT TATTGCTTGT GCTTCGGGCC AGCTCTCCCC TGGTTTCTAC AATGGAGTGT GTCCTCAGGC CCTGCCAACG  ATTCAGAGAA TCGTTCGGGA CGCTGTGCGG AATGAGGCGC GAATGGGTGC ATCGCTGCTC CGACTCCACT TCCACGATTG CTTTGTAAAT GGTTGCGACG GGTCAATCCT TCTTGACGAT  ACTTCGACCT TCACTGGAGA GAAGACTTCA AGGGCCAATG CAAACTCAGC TAGAGGCTTT GAGGTGATCG ATTCGATCAA AACCGCAGTC GACCAAGCCT GCGGGGGGAG CGTGGTGTCG 
TGTGCCGACA TCCTTGCTGT GGCAGCTCGT GACTCTGTGT ATGCG 

Retrieve as FASTA