Entry information : AtrPrx78(AmTr_v1.0_scaffold00029.235)
Entry ID 16663
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx78(AmTr_v1.0_scaffold00029.235)
Name AtrPrx78(AmTr_v1.0_scaffold00029.235)
Class Class III peroxidase    [Orthogroup: Prx010]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx78
start..stop
S start..stop
AtrPrx58 510 0 23..310 1..295
AtrPrx[P]73 478 4e-172 1..310 1..314
AtrPrx30 448 3e-160 8..310 11..320
AtrPrx28 447 1e-159 1..310 1..317
Literature and cross-references AtrPrx78(AmTr_v1.0_scaffold00029.235)
Protein sequence: AtrPrx78(AmTr_v1.0_scaffold00029.235)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   311
PWM (Da):   %s   33179.18  
PI (pH):   %s   5.35
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGFNGAATLA LLILLVSSNS FNMCFGQLSS NFYDSSCPNA LSTIRSKIRS AISAERRMGA SLIRLHFHDC FVNGCDGSLL LPEEKTARGN NNSARGFEVI DEVKSEVESI CPGVVSCADI  LAVAARDSSE AMGGPTWTVK LGRRDSATAS ETDANANLPS FTDNLDELIS LFSRKGLNTQ DLVALSGSHT IGQAQCSTFR DRIHNEANID SGFASTRQRG CPTSGSDTNL APLDLVTPTS 
FDNNYFKNLL QLKGLLHSDQ VLFNNGSTDG LVRTYSESRS TFYSDFASAM VKMGDIGPLT GSSGQIRTNC G 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (only exon 1 was predicted). End of the sequence was included in AmTr_v1.0_scaffold00029.231 (91000 nt!!!)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTTTA ATGGTGCTGC TACTCTTGCG CTACTCATAC TGTTGGTGAG CAGTAACAGC TTCAACATGT GTTTTGGGCA GCTGAGCTCC AATTTCTATG ACTCATCCTG TCCCAATGCT  CTCTCCACTA TCCGATCGAA AATCCGCTCG GCGATATCCG CTGAGAGGCG CATGGGTGCC TCCCTCATCC GCCTTCACTT CCACGACTGC TTTGTCAATG GATGCGATGG TTCGTTGTTA  TTGCCTGAAG AGAAGACAGC ACGTGGGAAC AATAACTCCG CGAGAGGGTT CGAAGTGATC GACGAAGTTA AATCGGAGGT GGAAAGCATC TGCCCAGGCG TTGTTTCATG CGCTGATATC  CTTGCCGTAG CAGCAAGAGA CTCTTCAGAA GCCATGGGAG GACCAACATG GACAGTGAAA CTAGGCAGAA GGGATTCAGC CACTGCAAGC GAGACCGACG CCAACGCAAA CCTCCCGAGC  TTCACAGATA ACCTCGACGA GCTTATCTCT CTCTTCTCCC GCAAGGGCCT CAATACTCAG GACCTCGTCG CCCTCTCCGG TTCTCACACC ATAGGCCAAG CCCAGTGCTC CACTTTCAGA  GACAGAATCC ACAACGAGGC CAACATCGAT TCCGGTTTTG CAAGCACCAG ACAGAGAGGG TGCCCAACAT CTGGTAGTGA CACCAACTTG GCTCCTCTGG ACTTAGTCAC TCCAACTAGC  TTTGATAACA ACTACTTCAA GAACTTGCTT CAATTGAAGG GCTTGCTCCA CTCTGATCAA GTCTTGTTCA ATAATGGCTC TACTGATGGT TTGGTCAGAA CTTATAGCGA GAGTAGGAGC 
ACTTTCTATT CAGATTTTGC CTCAGCTATG GTGAAGATGG GAGACATTGG GCCTCTTACT GGTTCTTCAG GGCAGATAAG GACTAATTGT GGG 

Retrieve as FASTA