Entry information : AtrPrx83(AmTr_v1.0_scaffold00339.5)
Entry ID 16668
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx83(AmTr_v1.0_scaffold00339.5)
Name AtrPrx83(AmTr_v1.0_scaffold00339.5)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx83
start..stop
S start..stop
AtrPrx[P]85 182 7e-59 3..131 6..134
PtPrx39 176 3e-56 7..130 9..132
AtrPrx76 168 2e-55 3..130 6..133
MtPrx01 173 6e-55 9..130 16..137
Literature and cross-references AtrPrx83(AmTr_v1.0_scaffold00339.5)
Protein sequence: AtrPrx83(AmTr_v1.0_scaffold00339.5)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   132
PWM (Da):   %s   13876.07  
PI (pH):   %s   5.58
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASVLTHAVA LVALAALANA HLSPYFYDNV CPQALPTIRN GVRAALRREA RLGPSILRLS FHDCFVNGCD GSVLLDDNGS FVGEKTAFPN VNSLRGFEVI DDIKEAVNQV CNGNVVSCAD 
ILVAAARDSV VE 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (onlt exon 1 and 2 were predicted due to scaffold border)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCTG TTCTCACCCA TGCAGTTGCT TTAGTGGCCC TTGCTGCACT GGCAAATGCG CATCTCTCTC CTTATTTCTA TGACAATGTG TGCCCTCAAG CACTGCCCAC AATTCGGAAT  GGTGTACGTG CTGCTCTCAG GAGAGAAGCA CGGTTGGGGC CTTCTATTCT TCGCCTCTCA TTTCATGATT GTTTTGTCAA TGGTTGTGAT GGTTCGGTGC TATTGGATGA TAATGGTTCT  TTCGTAGGGG AGAAGACCGC ATTTCCCAAT GTGAATTCAT TGAGGGGTTT CGAAGTGATC GATGATATCA AAGAAGCCGT GAACCAAGTT TGCAATGGAA ACGTTGTTTC TTGCGCCGAT 
ATCTTAGTGG CCGCTGCTCG CGATTCCGTG GTCGAG 

Retrieve as FASTA