Entry information : AtrPrx86(AmTr_v1.0_scaffold00066.148)
Entry ID 16671
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-11-14 (Christophe Dunand)
Peroxidase information: AtrPrx86(AmTr_v1.0_scaffold00066.148)
Name AtrPrx86(AmTr_v1.0_scaffold00066.148)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx86
start..stop
S start..stop
NnPrx30 231 2e-76 1..170 150..329
VvPrx58 226 2e-74 1..170 147..326
QpPrx01 218 6e-72 1..177 92..277
PpePrx77 216 1e-70 1..177 149..334
Literature and cross-references AtrPrx86(AmTr_v1.0_scaffold00066.148)
Protein sequence: AtrPrx86(AmTr_v1.0_scaffold00066.148)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   182
PWM (Da):   %s   19783.75  
PI (pH):   %s   8.61
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGAPAYPVLA GRRDGFTSSA KSVDLPSPSI TWQPGLDYFK SKxxxGAHSF GRTHCRYIHD RLYNFSGNGE PDPDLSPSLL SDLQKQCKPA KGISDPMVFL NPDSGDGYKF SNSYYKRILD 
KKAVLGIDQD LSYGNDTADI SDEFAGDFEY FRRMFALAIS RMGNLGVMTG RNQTKLQVYK QG* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (Exons 1 and 2 are missing)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCACCCTT ACCATATCTC TTATTTTTCA TCTTCGGGAG CTCACTCATT TGGCAGGACA CATTGCCGCT ACATCCATGA CCGCCTCTAC AATTTTTCCG GCAATGGAGA ACCCGACCCA  GACTTGAGCC CCTCTCTCCT CTCTGATCTT CAAAAGCAAT GCAAGCCAGC AAAAGGTATA AGCGATCCGA TGGTCTTCTT GAACCCCGAC TCGGGAGATG GGTACAAGTT TAGCAATTCC  TACTATAAGC GAATTCTCGA CAAAAAAGCG GTGCTCGGAA TAGACCAAGA CCTTAGCTAT GGAAATGACA CTGCTGATAT TTCGGATGAA TTTGCTGGAG ATTTCGAGTA TTTCCGCCGA 
ATGTTTGCAT TAGCAATAAG TAGAATGGGC AATCTTGGAG TCATGACAGG GAGAAATCAG ACGAAATTGC AGGTTTACAA ACAAGGATAA 

Retrieve as FASTA