Entry information : GbPrx78(Ginbil_Gb_31015)
Entry ID 16745
Creation 2020-12-06 (Christophe Dunand)
Last sequence changes 2020-12-06 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-09 (Christophe Dunand)
Peroxidase information: GbPrx78(Ginbil_Gb_31015)
Name GbPrx78(Ginbil_Gb_31015)
Class Class III peroxidase    [Orthogroup: Prx266]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx78
start..stop
S start..stop
GbPrx14 628 0 1..329 18..347
GbPrx79 589 0 1..329 1..318
PabPrx40 419 5e-148 1..329 1..329
PabPrx50 417 6e-147 1..329 1..329
Literature and cross-references GbPrx78(Ginbil_Gb_31015)
Protein sequence: GbPrx78(Ginbil_Gb_31015)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329
PWM (Da):   %s   35668  
PI (pH):   %s   9.07
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEFKALPLCK ITIICTFLMA GIAHAQLCTG FYDKTCPNLE SIVFSVVRNA VCKEQRMAAS LLRLHFHDCF VNGCDGSILL DKTTSMTGEK PAPPNKKSLR GFDVIDSIKT ALEAACSGVV  SCADILTIAA RDSVVLAGFP SWNVMLGRRD SRTANFNDVV PSLPAPDDGL SKIRSKFRKV GLDTTDLVAL SGGHTIGRAH CTSFNNRLFN YNGTGSPDPT IDKSYLTTLQ KRCPQGGNNR 
TLSPLDRDTP NSFDNNYFAN LQGKKGLLRS DQELYSKSGA TIKSVVDSFS SSQSTFFSNF KASMIKMGNI RPLTGSSGEI RLDCRKINS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction from SymD, exons 1, start of exon 2 and part of exon 3 are missingl).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAATTCA AAGCACTGCC ATTGTGCAAA ATAACAATAA TTTGCACATT TTTAATGGCA GGAATAGCGC ATGCTCAACT GTGTACTGGC TTTTACGATA AGACTTGCCC AAACCTAGAG  AGTATTGTAT TTAGTGTCGT TCGAAATGCA GTGTGCAAGG AACAACGCAT GGCTGCATCT CTGCTTCGTC TTCATTTTCA CGACTGCTTT GTTAATGGTT GCGATGGATC AATACTTCTA  GATAAGACAA CTTCAATGAC GGGAGAAAAA CCTGCTCCAC CCAATAAGAA GTCTCTCAGA GGATTTGATG TTATTGACAG CATCAAGACT GCTCTGGAGG CGGCGTGTAG TGGCGTAGTC  TCCTGCGCTG ATATCCTGAC TATTGCTGCG AGAGACTCCG TGGTTTTGGC GGGTTTTCCT TCATGGAATG TGATGTTGGG TAGGAGAGAT AGCAGGACAG CAAATTTTAA CGATGTAGTG  CCTTCTCTTC CTGCTCCAGA CGACGGACTA TCCAAAATTA GATCCAAATT TCGAAAAGTT GGCCTAGATA CAACGGATTT GGTAGCTCTA TCAGGTGGGC ATACTATCGG ACGAGCTCAC  TGCACATCGT TTAACAATAG GCTCTTCAAT TATAATGGCA CTGGAAGCCC TGATCCTACG ATTGATAAAT CATACCTTAC AACCCTGCAG AAGAGATGTC CTCAAGGTGG AAATAACCGA  ACCTTATCGC CTCTGGATCG TGATACGCCA AACAGTTTTG ATAACAACTA CTTTGCAAAT CTTCAGGGTA AAAAGGGTCT GCTTCGGTCA GATCAAGAGC TCTATTCAAA ATCAGGTGCA  ACCATAAAAT CTGTTGTTGA CAGTTTTAGT AGCAGTCAAA GCACCTTTTT CTCCAACTTT AAGGCGTCCA TGATTAAAAT GGGAAACATA CGCCCTCTGA CTGGAAGCAG TGGAGAAATC 
CGACTGGACT GCAGAAAAAT CAATAGTTGA 

Retrieve as FASTA