Entry information : GbPrx79(Ginbil_Gb_31016)
Entry ID 16746
Creation 2020-11-26 (Christophe Dunand)
Last sequence changes 2020-12-06 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-12-09 (Christophe Dunand)
Peroxidase information: GbPrx79(Ginbil_Gb_31016)
Name GbPrx79(Ginbil_Gb_31016)
Class Class III peroxidase     [Orthogroup: Prx255]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx79
start..stop
S start..stop
GbPrx78 560 0 1..318 1..329
GbPrx14 556 0 1..318 18..347
PabPrx40 377 1e-131 1..318 1..329
PabPrx50 375 1e-130 1..318 1..329
Literature and cross-references GbPrx79(Ginbil_Gb_31016)
Protein sequence: GbPrx79(Ginbil_Gb_31016)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318
PWM (Da):   %s   34453.52  
PI (pH):   %s   9.35
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEFKSLALCK ITVICTFLMA GVAHAQLCAG FYKKTCPNLE SIVFGLVKNT VRKEQRMAAS LLRLHFHDSG CDGSILLDNT TSITGEKTAP LNNKSVRGFD VIDSIKTAVE AACSGIVSCA  DILTIAARDS VVLMLGRGDS RTANFNDVVP SLPAPDDGLS KIRSKFRKVG LDTTDLVALS GGHTIGRAHC TSFNNRLFNY NGTGSPDPTI DKSYLTTLQK RCPQGGNNRT LSPLDRDTPN 
TFDNKYFANL QGKKGLLRSD QELYSKSSAT IKSLVDSFSS CQSTFFSNFK ASMIKMGNIR PLTGSSGEIR LDCRKINS* 

Retrieve as FASTA  
Remarks Pseudogene from genomic, end of exon1 and 2 are missing (incorrect prediction from SymDB, only exons 3 and 4 were predicted)
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTTGGGTA GGGGAGATAG CAGGACAGCA AATTTTAACG ATGTAGTGCC TTCTCTTCCT GCTCCAGACG ACGGACTATC CAAAATTAGA TCCAAATTTC GAAAAGTTGG CCTAGATACA  ACGGATTTGG TAGCTCTATC AGGTGGGCAT ACTATCGGAC GAGCTCACTG CACATCGTTT AACAATAGGC TCTTCAATTA TAATGGCACT GGAAGCCCTG ATCCTACGAT TGATAAATCA  TACCTTACAA CCCTGCAGAA GAGATGTCCT CAAGGTGGAA ATAACCGAAC CTTATCGCCT CTGGATCGTG ATACGCCAAA CACTTTTGAT AACAAGTACT TTGCAAATCT TCAGGGTAAA  AAGGGTCTGC TTCGGTCAGA TCAAGAGCTC TATTCAAAAT CAAGTGCAAC CATTAAATCT CTTGTTGACA GTTTTAGTAG CTGTCAAAGC ACCTTTTTCT CCAATTTTAA GGCGTCCATG 
ATTAAAATGG GAAACATACG CCCTCTGACT GGAAGCAGTG GAGAAATCCG ACTGGACTGC AGAAAAATCA ATAGTTGA 

Retrieve as FASTA