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Entry information : GbPrx80
Entry ID 16747
Creation 2020-12-08 (Christophe Dunand)
Last sequence changes 2020-12-08 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Peroxidase information: GbPrx80
Name GbPrx80
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value GbPrx80
start..stop		 S start..stop
GbPrx43 575 0 1..295 1..323
GbPrx58 526 0 1..295 5..330
GbPrx27 464 2.25e-166 1..295 11..337
PtaPrx69 444 1.79e-158 6..295 11..331
Literature and cross-references GbPrx80
Protein sequence: GbPrx80
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   295 (272)
PWM (Da):   %s   30862.34 (28369.0)  
PI (pH):   %s   4.79 (4.68) Peptide Signal:   %s   cut: 24 range:24-295
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQSTNALMTF KLIVVFMAIV ALADPQGTRV GFYYSTCPRA ExxxxGCDGS ILITGPSAEK NALTNLGLRG FEVIEDAKTQ VEAACPGVVS CADILALAVR DAVVLTRGPS WSVPTGRRDG  LVSSSSDAAL MPTPSDSIDV LKKKFSDKGL TAQDLVILSG AHTIGQTDCQ FFSYRLYNFT STGDADPTIN AQYLSQLQSL CPSGGDGTKR VALDKAGETT FDASFFRNVR DGNAVLESDQ 
RLWGDNTTQA VVQNYAGFGD GRFDYAFTQA IVKMSNVGVK TGSDGEIRKV CSAFN 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (no prediction from SymDB, scaffold20774, end of exon 1 is missing)
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGTCTA CAAATGCTCT CATGACGTTT AAGCTGATTG TTGTTTTCAT GGCCATTGTG GCCTTAGCCG ACCCTCAAGG AACGAGAGTC GGGTTTTATT ATTCCACATG TCCCAGAGCT  GAGTGAAAAG GAGGAACAAT ATTTTATGAA GAAAAAATGA AATGAAAAGG AGTAGGGTTT GAGTCCTCTC CCAAAAGAGT AGTTGTAGCC TTTGCTACAC CCCAAGCTAG ATTCGTCCTG  CCATATATAC TTTATAATTT CGTTTTGGTT TGAGTGCGTT AATATATATG AATATTGTCT GAGCCGCTGC ATAAGCGTAG TACTAACAGG CCGGCTTATA ATTGTTTGGC AGGGTTGTGA  TGGGTCCATC TTAATTACCG GTCCATCTGC AGAGAAAAAT GCTCTTACAA ATCTTGGGCT ACGAGGATTT GAAGTTATTG AAGATGCAAA GACACAAGTA GAAGCAGCAT GCCCAGGAGT  TGTTTCGTGT GCTGACATAC TCGCTCTTGC AGTCCGGGAT GCAGTAGTAC TGGTATTCAT AGATAGATAG ATATAGATAT ACGTGTGTGC GTGCGCGCCT TGTTTATCAA TTTTCATTAG  TCTGTTAACT GCTTTCATCT CCTTTTTATA ACGGAATAGG TGCATGCTGA ATTTGGTAGA GCTTATTCGT TATAAGCAAA ACGATCATTA AAAAAAACAT TAATTCTAAC TCTGTATATG  ATTGATCATA TTCGTGAAAT TGCAACGCAG ACAAGAGGAC CAAGCTGGTC TGTACCAACG GGAAGGAGAG ACGGATTGGT CTCATCTTCG TCGGACGCTG CACTTATGCC AACACCATCC  GACTCCATCG ACGTTCTGAA GAAAAAATTC TCTGATAAAG GCCTCACAGC ACAAGATCTC GTAATTCTTT CTGGTGGGCA ACGTTTCGAA ATTAATTATA CATAGCTTTT ACGCAATACA  AAATATATAC GCTCAAAACT AATATTATTT TTTGTTGTTA TTCAGGAGCA CATACAATTG GACAAACTGA TTGCCAATTC TTCAGTTACC GCCTCTACAA CTTCACATCC ACAGGGGATG  CGGATCCCAC AATAAACGCA CAATATCTGA GTCAGCTCCA ATCATTGTGC CCTTCGGGTG GCGATGGTAC GAAGCGTGTG GCTCTGGACA AGGCCGGCGA AACAACATTC GATGCGAGTT  TCTTCAGGAA CGTGAGGGAC GGAAACGCCG TGCTTGAATC GGACCAAAGG CTGTGGGGTG ACAACACCAC CCAAGCTGTG GTTCAAAACT ATGCCGGTTT TGGGGACGGG AGGTTCGATT 
ATGCTTTCAC ACAGGCTATC GTTAAGATGA GCAACGTTGG AGTGAAGACG GGCTCTGATG GCGAAATTCG CAAAGTCTGC TCTGCATTCA ATTGA 

Retrieve as FASTA