Entry information : GbPrx[P]83(Ginbil_Gb_02104)
Entry ID 16751
Creation 2020-11-26 (Christophe Dunand)
Last sequence changes 2020-12-08 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-12-08 (Christophe Dunand)
Peroxidase information: GbPrx[P]83(Ginbil_Gb_02104)
Name GbPrx[P]83(Ginbil_Gb_02104)
Class Class III peroxidase     [Orthogroup: Prx093]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value GbPrx[P]83
start..stop
S start..stop
GbPrx33 500 6e-180 17..324 43..350
GbPrx48 489 1e-175 17..324 43..354
GbPrx36 384 3e-134 16..300 41..330
GbPrx20 372 1e-129 16..319 38..352
Literature and cross-references GbPrx[P]83(Ginbil_Gb_02104)
Protein sequence: GbPrx[P]83(Ginbil_Gb_02104)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324
PWM (Da):   %s   34025.08  
PI (pH):   %s   6.98
Sequence
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Send to Peroxiscan
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MTKISFCYKF HKFKKTFYNE SYPNLESIVN ATLESFLEED ITQAAGLLIL HFHDCFVQQG CDASILLDGT TNDPSEQEAA PNLTLRAQTF KIINTIKAAV EAVCSGVVSC ADILTLATRD  SIKKAGGPKY VVPLGRRDIL NFANSSVTEQ NRPPPTSNVT RMMSIFGAKG FKMTDLVALS xxHSIGISHC ASFTNRLYPT LDPTFAKYLY LTCPTNSTVN TTNLDIRTxx xxxxxxxxxx 
xRQVLLTSDE ALNLNSTTQH IAKSFSQNQN LFFHSSILGM LKMSQLGVLT GSEGEIRKNC SISNSHSDHY SIYLIVDRDE ESSI 

Retrieve as FASTA  
Remarks Pseudogene from genomic (incorrect prediction from SymDB, frame shift and missing sequnece)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACTAAAA TAAGCTTTTG TTATAAATTT CACAAATTTA AGAAAACATT CTACAACGAG AGTTACCCCA ACCTGGAGTC CATAGTCAAT GCGACTCTCG AGTCTTTCTT GGAAGAAGAT  ATCACCCAAG CTGCTGGATT GCTCATACTC CACTTCCACG ACTGCTTCGT CCAGGGCTGC GACGCATCCA TCTTGTTAGA CGGGACGACC AACGATCCAA GTGAGCAGGA GGCTGCTCCA  AACTTGACAC TTCGAGCGCA GACCTTCAAG ATAATTAATA CTATCAAAGC CGCGGTGGAG GCCGTCTGCA GCGGCGTTGT ATCGTGTGCT GATATCCTGA CTTTAGCAAC TCGCGATTCC  ATCAAGAAGG CTGGAGGACC AAAATATGTT GTACCGCTTG GCCGCAGAGA CATCCTCAAC TTTGCCAATT CATCAGTTAC TGAACAAAAC CGACCTCCTC CAACTTCGAA TGTAACACGA  ATGATGAGCA TTTTTGGTGC GAAAGGGTTT AAAATGACAG ATCTTGTCGC GCTTTCAAGT CTGTGGCACA GCATTGGCAT TAGCCACTGC GCCTCCTTCA CAAATAGACT ATATCCAACT  CTGGATCCAA CTTTTGCAAA ACAAGTCCTC TTGACCTCTG ACGAGGCTCT CAACCTCAAC TCCACCACTC AACACATCGC CAAGAGCTTC AGTCAGAACC AGAATTTGTT CTTCCACAGC  TCCATTCTTG GAATGCTCAA GATGTCTCAA CTTGGTGTGC TCACCGGAAG CGAGGGAGAG ATCCGCAAGA ATTGCTCCAT TTCCAATTCG CATTCCGATC ACTATTCAAT ATACTTGATC  GTCGATAGAG ATGAAGAATC ATCTATTTTA TGTGATGACT CGTCACCTCC ACCACATTGC CACCAATGCG AATTGGGTTG GAATGGTGGT GGTAGCTCAT CCGACTTCAA TGCCGCTGTG  GCATACCTCG ATCGAGGTTG TGGGATACCT CGATCGAGGT ACTTGAACCT CAATCGAGGT GTTCGCACCT CGATCGAGGA GCCATACCTA CAGAGGCTAT GGGATCCCTC GATCGAGACA  TCCCGCCACC CCTACCGAAC GCCTCAATCA GGACGACATA CCCCTGGAGG CTATAATTTT GCTAGATGCC TCGATCGAGG TGTCCCATCA CCTCCCCGAA TTCATGTTAG AGTCGTGGTG  GTAGCTCACC CGACTTCAAT ACTGTCACGT CTCCACCTGC GCCTGGTGCA TCCCTGTTCA AACTCGAACA CGTCGTCGTC CAACATTCAC CGCCTGGTGC ATCCCAAGTC AAAGAGGAGA  GACAGAGTCG CCTGGTGCTG GTGCATTTGG AGTCCTCATC GATTCATTGC GTTGGAGTCA AAGATAAGCG TTCAATCGAT TATTTTGGTG ACTGCTCGCT TCTATGCCTT CTTTTTATTT 
TACCTGCACT CTATTTTACA AACGATTAAT TTAAGCGATG ATAGAATTTG A 

Retrieve as FASTA