Entry information : GbPrx[P]85(Ginbil_Gb_15313)
Entry ID 16753
Creation 2020-11-26 (Christophe Dunand)
Last sequence changes 2020-12-08 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-12-08 (Christophe Dunand)
Peroxidase information: GbPrx[P]85(Ginbil_Gb_15313)
Name GbPrx[P]85(Ginbil_Gb_15313)
Class Class III peroxidase     [Orthogroup: Prx016]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value GbPrx[P]85
start..stop
S start..stop
GbPrx44 556 0 1..314 19..332
PtaPrx92 405 9e-143 12..310 35..340
PabPrx170 404 2e-142 13..310 35..339
PabPrx159 404 2e-142 12..310 35..339
Literature and cross-references GbPrx[P]85(Ginbil_Gb_15313)
Protein sequence: GbPrx[P]85(Ginbil_Gb_15313)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   313
PWM (Da):   %s   33731.87  
PI (pH):   %s   8.65
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVVSHTADGR QSGLKVGYYR RTCPAAEDIV RATVAEAVKA NRGVAAGLIR MHFHDCFVRG CEGSILIDST PGNKAEKDSP ANNPSLRGFE VIDEAKAKVE AKCPQIVSCA DILAFAARDS  AYETGKIRWK VPAGRRDGST SRDTDITGNL PLNSFNVDQV TQNFAAKGLS QEDMVTLSGA HSLGLSHCSS FNNSNRLQSN GTLDSRLAAT LRIKCAP*LA GISDPTVAMD SFTPAILDNK 
YYKGLLLNRG LFTSDHTLLT NPSTFCMADL NSKKPSFWRH NFGSAMVRMA AIDVLTGSQG EIRRNCRIVN SDYY 

Retrieve as FASTA  
Remarks Pseudogene from genomic sequence (incorrect prediction from SymDB, last exon is missing). Stop in frame
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTAGTTA GTCATACAGC TGATGGCCGA CAATCTGGAT TAAAGGTGGG TTACTACCGC CGCACATGCC CTGCAGCTGA GGACATTGTA AGAGCAACTG TGGCAGAGGC TGTGAAGGCA  AATCGTGGTG TAGCCGCGGG TCTCATACGG ATGCATTTTC ACGATTGCTT TGTCAGAGGT TGCGAGGGGT CAATCCTGAT CGATTCCACC CCTGGAAATA AAGCAGAGAA AGATTCACCT  GCGAACAATC CTAGCCTTCG TGGGTTCGAA GTAATCGACG AAGCAAAGGC CAAAGTAGAA GCCAAATGTC CCCAGATCGT GTCGTGTGCT GACATACTCG CCTTTGCAGC ACGAGACAGT  GCATATGAGA CTGGTAAGAT TCGATGGAAG GTTCCAGCTG GAAGAAGGGA CGGGAGTACA TCTCGAGACA CCGATATCAC AGGAAATCTG CCTCTTAATT CATTCAATGT CGACCAGGTG  ACACAGAATT TCGCAGCAAA GGGTCTTTCA CAGGAGGACA TGGTCACTCT TTCAGGGCCT TCTTCTCAAC CGTGGATTGT TTACCTCCGA TCACACACTG CTCACCAATC CTTCCACCTT  CTGCATGGCC GATCTCAACT CCAAAAAGCC ATCGTTCTGG CGTCACAATT TTGGCTCTGC AATGGTAAGG ATGGCTGCGA TCGACGTGTT GACCGGATCT CAGGGCGAGA TCAGAAGAAA 
CTGCCGAATC GTCAATTCCG ACTATTATTA AATGCACCAG ACCTCATCCA AATGCGTCCT GCGCAGAAGA CTTTTGAAAT TAAGGCTGCA AAATGA 

Retrieve as FASTA