Entry information : GbPrx[P]86(Ginbil_Gb_24581)
Entry ID 16755
Creation 2020-11-26 (Christophe Dunand)
Last sequence changes 2020-12-09 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-12-09 (Christophe Dunand)
Peroxidase information: GbPrx[P]86(Ginbil_Gb_24581)
Name GbPrx[P]86(Ginbil_Gb_24581)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value GbPrx[P]86
start..stop
S start..stop
GbPrx51 172 4e-55 1..99 234..332
PtaPrx104 126 5e-37 1..99 234..332
PabPrx151 122 2e-35 1..99 239..337
PabPrx127 99 1e-26 1..99 231..331
Literature and cross-references GbPrx[P]86(Ginbil_Gb_24581)
Protein sequence: GbPrx[P]86(Ginbil_Gb_24581)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   99
PWM (Da):   %s   11210.64  
PI (pH):   %s   10.02
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

FANAIKRRCP RRNPNGNTMV PMETITPTIL DNVYYGEVLS SRGLFTSYRT LLTQPTTASM VMENWFDNLE RKNKFKAAMV KTGEVGVLTG SRCEIHLNC* 

Retrieve as FASTA  
Remarks Pseudogene from genomic (found in scaffold1113 and scaffold41434 (end exon 4 ). Incorrect prediction from SymDB.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATTGACC TACGTGCAGT AAAATGCGTT CTTGAATTGG AGCCACATGA TGGACCTACT TATGTACTGT TGTCAAATAC ATATGTGATA GTTGGCAAGT GGAGTGATGT AGCGAAAGTT  AGGAAAATGA TGAAAGATAG AGCAGTGAGA AAGGAACCTA CACAGAGTTG GATTGAGGTC GAGGATTGGG TGCATACATT TGTCGTAGGA GATAAATCAC ATCCAAAAAT AGAAGAGATC  TATGCAAACC TTGAGGATTT GGTTGAAAAA ATGAAAGAGG CAGGCACGCT ATACATTTTA TTTTCCATCT ATCTGTATGG ATTCGCGAAT GCAATCAAGC GACGTTGTCC TCGAAGAAAC  CCCAATGGAA ATACTATGGT GCCAATGGAG ACCATCACAC CAACTATTTT GGATAATGTT TATTATGGAG AAGTTCTTTC GAGTCGGGGT TTGTTCACCT CTTATCGAAC ACTGCTCACA  CAACCAACCA CTGCAAGCAT GGTTATGGAG AACTGGTTTG ACAATTTGGA GCGGAAGAAC AAGTTCAAAG CCGCCATGGT GAAGACGGGC GAGGTCGGTG TACTCACGGG AAGCCGTTGC 
GAGATTCATT TGAATTGTTG A 

Retrieve as FASTA