Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
295 (269) |
PWM (Da): |
30640.55 (28045.1) |
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PI (pH):
| 8.83 (8.37) |
Peptide Signal:
| cut: 27 range:27-295 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASSLPRRMA LVVLVVLAAT ATSVSAQLST TFYDTICPSA LSTIKAAVVS AVQQENRMGA SLLRLHFHDC FVQGCDASVL LDDTATFTGE KTAGPNMGSL RGFExxxxxx xxLGGPSWNV
PLGRRDSTTA SFGSANTDLP SPFSSLATLI SAFQAKGLNL QDLVALSGAH TIGQSRCSLF RDRIYNDTNI APLFALKRRL QCPRSGGDDN LAPLDNLTGN RFDNAYYLNL LFKRGLLHSD
QELFNGGAAD AQVRTYSLNP LAFSRDFAVA MVKMGNISPL TGTNGQVRTN CRRVN
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Retrieve as FASTA
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Remarks |
incorrect prediction, exon 1 and start of exon 2 are predicted. Eurfer_11_19184273_19185013_g19432.t1_-1_CDS_2836092227_2418. End of sequence found 19184001 to 19184312 and 19183756 to 19184004.
19192784 to 19193173 other last exon, found GAHTIGQSRCSLFRDRIYNDTNIAPLFALKRRLQCPRSGGDDNLAPLDNLTGNRFDNAYYLNLLFKRGLLHSDQQLFNGGAADAQVRTYSLNPLDFSRDFAVAMVKMGNISPLTGTNGQVRTNCRRVN |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCGT CCTTGCCCCG TCGCATGGCC TTGGTGGTGC TCGTTGTTCT TGCAGCAACA GCAACTTCGG TTTCAGCTCA GCTGAGCACC ACCTTCTACG ACACCATCTG CCCCTCCGCA
CTCTCCACCA TCAAAGCTGC CGTGGTCAGC GCCGTGCAGC AGGAGAACCG CATGGGTGCC TCCCTCCTTC GTCTCCACTT CCATGATTGC TTCGTTCAGG GGTGTGATGC TTCGGTTCTG
TTGGACGACA CGGCGACGTT CACCGGCGAG AAGACGGCGG GACCAAACAT GGGCTCCCTC CGTGGCTTTG AGTCGTTGCG CTCGGTGGGC CTTCTTGGAA CGTACCGCTA G
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Retrieve as FASTA
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