Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
324 (301) |
PWM (Da): |
34713.74 (32350.4) |
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PI (pH):
| 6.5 (5.96) |
Peptide Signal:
| cut: 24 range:24-324 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRKTSSFFLA TLALLGLVAG SQAQLKVGFY EPSCP*AECI IKEFVKQHIL NAPTLAAALL RMNFHDCFVR GCDGSLLLNS ASNSTAEKDA IPNSTLRGFD FIDRVKALLE AECPGVVSCA
DTLALVARDA IAVIGGPSWT VPTGHRDGTV SLASEALTDI PSPAFNFTTL KKNFAPKNLD VKDLVVLSGV HTIGIAHCAV VTNRLYNFTG KGDEDPTLDK FYAASLKKFK CKTPTDTTTI
LEMDPGSFRT FDTHYYTNVV KRRGLFSSDS SLLTDATAAS YVTEILNGPI ENIFxFAASM EKMIEIEVKT GSEGEIRKVC GVVNG
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Retrieve as FASTA
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Remarks |
Incorrect prediction, splicing error end exon 1 (stop in frame), and missing part last exon (frame shift). Eurfer_22_8220487_8221988_g24236.t1_-1_CDS_2836141052_19239 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGAAAGA CCAGCTCCTT TTTCCTTGCA ACATTGGCTC TTCTGGGCCT CGTGGCTGGC TCCCAAGCTC AGCTTAAGGT CGGCTTCTAT GAACCATCCT GCCCATAAGC AGAGTGCATA
ATCAAGGAGT TCGTGAAGCA GCATATCCTC AATGCGCCTA CTTTGGCAGC AGCATTGCTT AGGATGAACT TCCATGACTG CTTTGTGAGG GTGAGTACTG CGTTGATCTG CAGTTTTTAA
TCTTGCCATC TTCAGATTCA TTTCCTAGCT ATACCTGTTT ATGAGAAAGC TGTGTCTCAA GCCCCTGTTT GTGAGAAAAA AAGGTGTCGA CAACTTCACT GTGAACTTAC ACTTCTCATT
TGCTTACGAG TTCGAATATT GAATTAATTC TTATGGTTTA GTTCATGGGA GCTGCCTTCA CTGGTACTGC TTATATATAT TGAACTGGTT GCCATCTTTC CCTGTGAAAG AACACTAGTA
AAGTTCAACT TTTCTAAATT GCACTGTATT TCATCGATGG TGATGATAGT CTCATTCAAA CTGCGATTTC ACAGGGCTGT GATGGATCCC TGCTGCTTAA TTCGGCCAGT AACAGCACGG
CAGAGAAGGA CGCCATACCA AATTCCACCC TCCGTGGCTT CGATTTCATT GACAGAGTGA AGGCATTGTT AGAAGCAGAG TGCCCGGGGG TCGTCTCCTG TGCAGATACT CTTGCACTAG
TAGCAAGAGA TGCAATAGCT GTCATTGTAT GACTGCCTTA CCACATCTAA AATAACTTTT CTTCTTAGTT GTTAGCATGA ACTCACTGTA CTGCAAATAT CCTGCCACAG GGTGGCCCGT
CATGGACAGT GCCTACAGGC CATAGGGATG GAACTGTTTC ATTAGCTTCT GAGGCGCTCA CCGACATTCC ATCACCAGCC TTCAATTTTA CTACTCTAAA GAAAAATTTT GCACCCAAGA
ATCTTGATGT GAAGGATCTA GTTGTCCTCT CAGGTGGGTC TCCATTTTTA TGCCATTTAG GATCTTTTAA CTAAGTCCAA TATTTATTTA AATGCTTAAT CAGTTCTTTT CTCTGTTTTC
TGCAGGTGTC CATACAATCG GCATTGCTCA CTGTGCGGTT GTCACAAACA GGCTCTATAA TTTCACTGGG AAAGGTGATG AAGACCCAAC CCTTGACAAA TTCTATGCTG CAAGCCTAAA
GAAATTCAAG TGCAAGACCC CCACAGACAC CACCACCATC CTAGAAATGG ATCCGGGCAG TTTCCGGACA TTCGACACGC ATTACTACAC CAATGTGGTA AAGAGAAGAG GCCTCTTCAG
CTCTGACTCT TCTCTGCTCA CAGACGCAAC TGCGGCGTCT TACGTGACTG AAATACTAAA CGGTCCTATT GAAAATATAT TTCACTCAGT TTGCTGCGTC CATGGAGAAG ATGATTGAGA
TTGAAGTCAA GACTGGCAGT GAAGGTGAGA TAAGGAAGGT CTGCGGCGTG GTGAATGGTT AG
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Retrieve as FASTA
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