Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
319 (294) |
| PWM (Da): |
34352.62 (31808.3) |
Transmb domain: |
i7-29o |
| PI (pH): |
4.49 (4.49) |
Peptide Signal: |
cut: 26 range:26-319 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAATPAVSLV IMLAVFFFFS GTATAQLSVS FYAKACPSVY ETVRAGVRSA INEEARWGAS ILRLFFHDCF VNGCDGGVLL DGEDGEKAAE PNLTLRGFEL IDSIKSQVDS ACGGDAVVSC
SDILAIAARD SVVEMGGPTY EVPLGRRDTK TANKDDANQL PSPSIDLDDL ARNFENKGFS MREMVALSGA HTVGFAHCSV FRERIYNETN IDPYFATTCH GICPSTEGEG ENNLAPLDHL
SPNKFGNDYF KALLNRMGLL HSDQVLFNGG SADDIVRTYA GDRNAFFVDF ANAMVKLGNM SPLTDDQGEV RVNCRMVNY
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Retrieve as FASTA
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| Remarks |
Incorrrect prediction, exons 3 and 4 are missing. Eurfer_27_11012152_11012708_g08981.t1_-1_CDS_2836159634_18507 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTTAAATTGC TCCATTCCTG CAATTTCTTT TTCAATAATT AAGTATAGTA GTTGTTTTAG GAAAATAATA CAAGGAAACA AGACGTAAAA TTGAGCGAGA GATAGATAGA GGATGAACCA
CAGTATCAAA AGCATGTGTA TGCAGTGGTA ACAGGCTTTT AATTCTTCCT ACACGTTATT AATAGCAATT AAAGACCGAG TAGTAGGACC GCCCTATTTT TTAAAAAAAG AACCTGTTTT
TGAACGCTTA AATTAGGCTT AAATATGATC ATTATACAGT ACTAAAATGA AGTTCCTAAT ATGAAAAATG TAATTGTACA CATTTTATGT TACGTAGAAT AATAGGGTGA GCTGTTGGCT
GCTAATTAAT ATATGCATGC AGTTATACAT ATACATATAT ACATATATAT ATATATCCTT AGGTGCATGT CACAACAACA ATAGTTAAGA TAAGATAGAG AATAAATAGA AGCTAGTCAC
GAGCAATGCC CCCAGATTTT CTTTGCGAGT CTGTGCTTTG TGCAAAGTAG CCATGATTCG CTTTGTAAGT GCATACTTTG TGTTTTGTCC TAAGTTTTGC AGAACGACGC TTGCTTTGGG
CATATATATA TATATAATTA GTATTGCAAA GTGGGTTTTT TGATCAAATT ATCAAGATCA ACTATAGAAT ATCCAATATA TATATATGAA ACCCTAGAAA TTGAATTGCT ATTTTGATCA
AGAATATATT TTTAGGAATC TAAAACTTGA ACAAAAAGAT ATATTGATGA TATCTTATAT GAATATCAAA GAATATTACA TGATTTATAG GTCCAAGTCT TAAAACCTCA AAGTCTAGAT
CTCATTGAAC CTGATTCAAT AAGATATACA TCGAATATAT TGAATTTTGT TTGCCACCAA TTAAGTGGAA ATCAATACTG ATAAATTTCA TTATCAATAT AACTCATTGC AGAACAACGA
GCCAAGCCAA CTTGAACTCG ACTAGGACTC GCTTTTAAAA ACTCGATTTG AAGTTCAAGT TTCATTTTAA GATGAAACAA TTTAATGAGT TCAATCAATA CTTGGCTTAC TTCCTTGAAA
CCTCCATGAG AAAAGAAAAC CCACGCTAAG TGCAAGTAAG TGTAGAAGCC CATACTAAAG TCTCTTCAGA ACAGGTCCAC ACGTGGGGGC AAGCGGCGCC CCTCTACCAA GGCCAAGTCC
GAGTCAAAAT TTTCAAGGCC TTTCACTATT TCAATAAAAT CAAATGGAAC TTTTTTTTAC TCAAGGGGAC AAGCTTTTAG TTGTAATCAC AGAGAAGCAC TTCCTGATTT TCCAATTTTG
CAAAATGAAT ATGTCAACTT CAAAGTGCTC TCCCTTCTTA AACATTGCAT ATAAAACGTA TAAATTGTTC TTGCACATGC ATGTTCTATG CCGATAATCC ATGTTTTATG TCTTTAATCT
TGTTTAATTG AAGCTAAATA GAAAATAATA CATCATAAAA GAATAGAAGC CAGATAGAAA TTAAATTGCA CATAATACAA TACCATTATG TGATGATCCA AATCTGCACC AGACCCAAGA
AGCAAACAAG TTAAGATGCA TCATGCACGA TTGAACGTTC AACTTTCAAC TCCTGTTTCA GAAAAATAAA AAGAAAGGAG GCGTAGAATG GGGTTCCCGA GGAGAGTATA TGTATATATA
TATATATATA TATATGAGTC GCACCATGCA TCATTATCAT CTGTCAGCCA TTAAAGTAGA ACCAGTACTT GTTTTCCATC CTCTGAGCAT TTCAGTGTGT GATCATGGCG GCTACACCTG
CAGTTTCTCT TGTGATTATG CTTGCGGTCT TTTTCTTCTT CTCTGGCACT GCCACCGCTC AGTTATCAGT CTCCTTCTAC GCCAAAGCAT GTCCGTCCGT CTACGAAACA GTGCGTGCTG
GTGTGAGGTC GGCTATCAAT GAGGAAGCAC GTTGGGGAGC ATCTATTCTG CGTCTCTTCT TCCATGATTG CTTCGTTAAC GTGAGTATCT CTTAAGACAG CCATTAAATG TTTGTTAATT
TATTATTATA TTTAACGATT GGATTGAAGA AGACGTAAAC GAGATCCGTT CCGGATTAAG GTTGTTAATT AATGACAATC ATGAACAGGG ATGCGATGGG GGTGTCCTTC TCGATGGCGA
GGACGGAGAG AAGGCGGCTG AGCCTAATCT CACCCTCAGG GGATTTGAAC TCATCGACAG CATCAAATCG CAGGTGGACA GCGCTTGCGG CGGTGACGCC GTCGTTTCCT GCTCCGACAT
TCTTGCCATT GCTGCTCGTG ACTCTGTTGT AGAGGTCTGT AATCAGGCTC CTGTAATTTA ATTCATGTCT TCTTGTAAAC TGATTTTTTT TCATGTTGGT AACGGTACAG TCGATCTCCT
CAATTGCCAC TGTCACCACT TTTGCACACC GACTGCGATT ACCGCAGTTA CTATTGTTAA AAATGAACGG AATGTAACTT CCACTGGAAT CAGCAGAGAA ATTCACAAAA TGAGCGTTTT
AGTGATCTTT TTTTTAACTT TTCGTAACAT CTTTCAGTGC TGTCTTCTTA AATTCTGATC CTATTTCTTC ATTTTCAGAT TCTTAATGTC CTTTTATGAA AAATGATTAT GGTTTCTATA
CTTTGTTCAC CAGCTCTAGA CTCGTTAATT TTGATTAGAA ACAATGTTCT AATTTTAATT CCAGATTTAG ATAACTAAAT TGAATTAATA TTGTTCCCTA ACAATGAAGA AACTCAAATT
ATTTGGTGGG CAGATGGGAG GGCCGACTTA CGAGGTGCCC TTGGGTAGGA GAGATACAAA GACTGCCAAC AAAGATGACG CCAACCAGTT GCCGTCACCG TCCATAGACT TGGACGACCT
TGCCAGGAAT TTCGAGAACA AGGGGTTCAG CATGAGGGAG ATGGTCGCTC TCTCCGGTGC TCACACCGTC GGCTTCGCTC ACTGCAGCGT CTTTCGTGAA CGCATCTATA ACGAGACCAA
CATCGACCCT TACTTTGCGA CCACCTGCCA TGGCATCTGT CCGAGCACCG AGGGTGAGGG CGAGAATAAC TTGGCGCCAT TGGACCATCT GAGCCCCAAT AAGTTCGGCA ACGACTACTT
CAAGGCGCTG CTCAACAGGA TGGGGCTGCT TCATTCGGAC CAAGTCCTCT TCAATGGTGG CTCTGCGGAC GACATCGTCA GGACATACGC CGGTGACCGC AATGCTTTCT TTGTGGACTT
CGCCAATGCG ATGGTGAAGT TGGGAAATAT GAGCCCTCTC ACTGATGATC AGGGTGAGGT GAGAGTAAAC TGCAGGATGG TCAATTACTA ACAACTCAAA TCCTTGCCTT GGTCCAAGAA
TCTCTTTGTC TCTGTAATAA TGTGATTTAG AGTTGTTCTT TTGTATTTGT AATTTAATAA TTTGTTGGTA TGCTCAGTGT ATATGCATGA AGTGCATGCA AAGGAAATTT GTGGTATATA
TACGTAAAGG TGTGTAAGTG ATCATATCAA CTATGAAACT ATCACAATTT GGCCGCTTTA GTACCATCTT CTTCTTGCCT GTTTTCCTTT TTTTCCTTAT TCCGCTTGTC ACAATTTTAT
TAAATAATTT TATGTTTCTT AATATCTACA TCTATATATA AATACTATGT GGAATTAAAT CTTGCAATGT AACCCTCCTG AAAAGTTTAA AATGAAGATT ATATATTAAC TTAGATCGCA
AAGAGGCTAA CAAGAAATTC TTGTCTTGAG CAAAATTAAC CAAAGTCATC TTAGAGGAAG CAGGAAAACA TGTACGATAG AATGAAAGAA CAAAATATGT TGTCATATAA TATAAGATAG
ATCAAATGTG ATAACATGAT ACATCTTATT GAATTCAATC CATTAATATT CATGTTCAAT ACCATGCTTT GATTAGTATT CTTTGAGAAT GAATGTATTC GTTGGAATGA ATTACCAAAT
CCTGGAAGTT CATTCCCGAT TCAACCCTGC TGCGAGGACA CCCCTTGGTG TTCTTTATGT TTGTGCAGTT CATAAACTTT GCATGAATTG TCTAATAAAA CACACTCAAG AAAGGAAGTC
GTTTAGTGGG TGAAATGTGA ACACCTAAGA CCAAAGATTT ACTGCCAGT
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
| ATGGCGGCTA CACCTGCAGT TTCTCTTGTG ATTATGCTTG CGGTCTTTTT CTTCTTCTCT GGCACTGCCA CCGCTCAGTT ATCAGTCTCC TTCTACGCCA AAGCATGTCC GTCCGTCTAC
GAAACAGTGC GTGCTGGTGT GAGGTCGGCT ATCAATGAGG AAGCACGTTG GGGAGCATCT ATTCTGCGTC TCTTCTTCCA TGATTGCTTC GTTAACGGAT GCGATGGGGG TGTCCTTCTC
GATGGCGAGG ACGGAGAGAA GGCGGCTGAG CCTAATCTCA CCCTCAGGGG ATTTGAACTC ATCGACAGCA TCAAATCGCA GGTGGACAGC GCTTGCGGCG GTGACGCCGT CGTTTCCTGC
TCCGACATTC TTGCCATTGC TGCTCGTGAC TCTGTTGTAG AGATGGGAGG GCCGACTTAC GAGGTGCCCT TGGGTAGGAG AGATACAAAG ACTGCCAACA AAGATGACGC CAACCAGTTG
CCGTCACCGT CCATAGACTT GGACGACCTT GCCAGGAATT TCGAGAACAA GGGGTTCAGC ATGAGGGAGA TGGTCGCTCT CTCCGGTGCT CACACCGTCG GCTTCGCTCA CTGCAGCGTC
TTTCGTGAAC GCATCTATAA CGAGACCAAC ATCGACCCTT ACTTTGCGAC CACCTGCCAT GGCATCTGTC CGAGCACCGA GGGTGAGGGC GAGAATAACT TGGCGCCATT GGACCATCTG
AGCCCCAATA AGTTCGGCAA CGACTACTTC AAGGCGCTGC TCAACAGGAT GGGGCTGCTT CATTCGGACC AAGTCCTCTT CAATGGTGGC TCTGCGGACG ACATCGTCAG GACATACGCC
GGTGACCGCA ATGCTTTCTT TGTGGACTTC GCCAATGCGA TGGTGAAGTT GGGAAATATG AGCCCTCTCA CTGATGATCA GGGTGAGGTG AGAGTAAACT GCAGGATGGT CAATTACTAA
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Retrieve as FASTA
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