Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
320 (295) |
| PWM (Da): |
33881.82 (31364.5) |
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| PI (pH):
| 6.11 (5.67) |
Peptide Signal:
| cut: 26 range:26-320 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MALPVSRCMA LVVFLVVALA TCASAQLSTT FYDSVCPTAL STIKQTVVSA VGKEARMGAS LLRLHFHDCF VQGCDASVLL DDSATIKSEK SAAPNMGSLR GFDVIDSIKS AVDQACGATV
VSCADIVAVA ARDSVVALGG PYWDVPLGRR DSTTASFDKA NSDLPPPSAS LADLITFFQA KGLNQQDMVA LSGAHTIGQS RCTQFKDRIY NDTNIEPLFA AKRQLQCPRS GGDDNLAPLD
NLTPYQFDNS YYQNLLFKRG LLHSDQELYN GGAADAQVRT YSLNPSAFST DFSAAMVKMG NISPLTGTSG QVRVNCGKVN
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Retrieve as FASTA
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| Remarks |
Incorrect prediction, end of exon 3 and exon 4 are missing. Eurfer_18_10161948_10164763_g30442.t1_-1_CDS_2836121327_7274 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCACTCC CAGTCTCACG TTGCATGGCT TTGGTTGTCT TCTTGGTTGT TGCACTGGCA ACTTGTGCCT CTGCTCAACT GAGCACCACT TTCTACGACA GTGTCTGCCC TACTGCACTC
TCCACCATTA AACAGACTGT AGTGAGTGCT GTGGGCAAGG AAGCTCGCAT GGGTGCTTCC CTCCTTCGTC TTCACTTCCA CGACTGCTTT GTTCAGGTAA ATAAAAGAAG ACCAATTACA
TGATCATTGT CACGCTTCGA TGCATAAAAT GATGAAACCA TCGTTGCAAG TGACTTAATT TTTTGAGTCG GATACTTTAG GCGCTGTTTA GTAATTAACT TTGGTTTGTG ACTTATCTTC
ATTGACGTAC GTGAAATGGG TGTAGGGCTG TGATGCTTCA GTTCTACTGG ACGACAGTGC GACCATCAAA AGTGAAAAAT CAGCTGCACC CAACATGGGT TCTCTCCGAG GCTTCGACGT
CATCGACAGC ATTAAATCAG CGGTCGATCA GGCTTGTGGT GCCACCGTCG TCTCCTGTGC TGACATCGTC GCTGTCGCTG CCCGTGACTC CGTCGTTGCA GTATGATCTC CTCATCTTCC
TATGCCTTCC TTTCTTAGGT CTTAACCTCT CTTCTTTCTT ACCTCTTCAT GCAGAAACTA AGTGATGAAT GTTTTTCTTT TGTATCTTGT AGCTTGGTGG GCCTTACTGG GATGTGCCTT
TGGGAAGGAG AGATTCTACA ACTGCTAGCT TCGATAAAGC AAACTCCGAC CTCCCACCAC CCTCTGCAAG TCTTGCTGAC CTTATTACTT TTTTCCAAGC AAAGGGTCTG AACCAGCAAG
ACATGGTCGC CTTGTCCGGT GCACACACCA TCGGCCAATC TCGCTGCACT CAGTTCAAGG ATCGCATCTA CAATGACACC AATATCGAAC CCCTTTTTGC CGCCAAGCGC CAACTGCAGT
GCCCTCGATC TGGTGGCGAT GACAACCTTG CCCCCTTGGA CAATCTCACT CCCTATCAGT TTGACAACTC CTACTACCAG AACTTGTTAT TCAAAAGGGG TCTGCTTCAT TCGGACCAGG
AGCTCTACAA TGGTGGCGCT GCTGATGCAC AAGTCAGGAC CTACAGCCTC AACCCTTCGG CTTTCTCAAC AGATTTTTCT GCTGCCATGG TGAAGATGGG CAACATAAGC CCTCTCACCG
GCACCAGTGG CCAAGTACGT GTCAACTGCG GGAAAGTGAA TTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCACTCC CAGTCTCACG TTGCATGGCT TTGGTTGTCT TCTTGGTTGT TGCACTGGCA ACTTGTGCCT CTGCTCAACT GAGCACCACT TTCTACGACA GTGTCTGCCC TACTGCACTC
TCCACCATTA AACAGACTGT AGTGAGTGCT GTGGGCAAGG AAGCTCGCAT GGGTGCTTCC CTCCTTCGTC TTCACTTCCA CGACTGCTTT GTTCAGGGCT GTGATGCTTC AGTTCTACTG
GACGACAGTG CGACCATCAA AAGTGAAAAA TCAGCTGCAC CCAACATGGG TTCTCTCCGA GGCTTCGACG TCATCGACAG CATTAAATCA GCGGTCGATC AGGCTTGTGG TGCCACCGTC
GTCTCCTGTG CTGACATCGT CGCTGTCGCT GCCCGTGACT CCGTCGTTGC ACTTGGTGGG CCTTACTGGG ATGTGCCTTT GGGAAGGAGA GATTCTACAA CTGCTAGCTT CGATAAAGCA
AACTCCGACC TCCCACCACC CTCTGCAAGT CTTGCTGACC TTATTACTTT TTTCCAAGCA AAGGGTCTGA ACCAGCAAGA CATGGTCGCC TTGTCCGGTG CACACACCAT CGGCCAATCT
CGCTGCACTC AGTTCAAGGA TCGCATCTAC AATGACACCA ATATCGAACC CCTTTTTGCC GCCAAGCGCC AACTGCAGTG CCCTCGATCT GGTGGCGATG ACAACCTTGC CCCCTTGGAC
AATCTCACTC CCTATCAGTT TGACAACTCC TACTACCAGA ACTTGTTATT CAAAAGGGGT CTGCTTCATT CGGACCAGGA GCTCTACAAT GGTGGCGCTG CTGATGCACA AGTCAGGACC
TACAGCCTCA ACCCTTCGGC TTTCTCAACA GATTTTTCTG CTGCCATGGT GAAGATGGGC AACATAAGCC CTCTCACCGG CACCAGTGGC CAAGTACGTG TCAACTGCGG GAAAGTGAAT
TAA
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Retrieve as FASTA
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