Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
283 |
| PWM (Da): |
31073.17 |
Transmb domain: |
o256-278i |
| PI (pH): |
7.13 |
|
Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASPVVDEAY LKEVDKARRL LRALIAQKGC APIMLRLAWH DAGTFDKTMK TGGPNGSIRN EEEYRHGANN GLKIALNFCE EIKAKCPKIT YADLYQLAGV VAVEVTGGPT VDFVPGRKDS
LVSPKEGRLP DANKGAPHLK DIFYRMGLTD KDIVALSGGH TLGRAHPERS GFEGAWTKEP LKFDNSYFIE LLKEQTEGLL QLPSDKALLE DPNFRPFVEL YAKDEELFFK DYAESHKKLS
ELGFTPPGPR PVKSATILAQ SAVGVAVAAA VVILSYMYEV RRK
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Retrieve as FASTA
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| Remarks |
Incorrect prediction, very long 3' end (should stop at AVVILSYI). Eurfer_22_5273451_5283302_g24528.t1_1_CDS_2836141928_6152 |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGTCTC CAGTGGTGGA CGAGGCATAT CTGAAGGAGG TCGACAAGGC CCGCCGTCTT CTTCGAGCGC TCATCGCTCA GAAGGGCTGC GCACCGATCA TGCTTCGATT GGCGTACGAC
CCATTTGCTT ATTTTCTGCC TCCTTGACAC TTGTTCCCGC TAACTTCTGG CGGGGTGCTT GAGCTTTTAG TTTCTGACTC GAGTTTGCAT CTACCTGTTT AGTCATATCC TTTGTTGAAG
GAGGTTTGCG TTCTTGTCAT TCCTTTCTGT TTCGACTAGT AAATGACCGG ATCCCATCTA CGACTTTAGC TCATCTGCGA TGTTTCTCGA TGTTCTACAG CTAAGTAGAT CATTTATAGG
TTTGTGACCA TGGGATCAAA CCTTTGTTAT TTTTATCATG TCATCAGTCA AAAAGCAGTA CTGATTGCAT ATTCAGATTT CAATGCTTGC TCTTTAGGAC TGCAATTAAT GTCCAAACCA
CTTGGATGCA CACACACACT GGCGCGCGCA TGTACGACCT CTTATCTTTT TGTACGTTTC ATGCTATGTC ATTCCTTTTG TTGAGGACTG AGGAGTGCCT AATTTACCCG GAAAAGATAG
TAGGAGAGTG AAAGGGGAAG ACCTTACATA CAAGAACCGC TGTTCGTCTC TGGCCCTAGA ATTAGTTTTT TAGATTTTAT TCTTTTATGA TTCCTGAAAC AGTGGAGATG ATTATCTACG
TCGTAGTACA ATTTGCTATT TGATTGAATT ATGAGATCTC AAATCCAGTG GGCCTTCTTT TTATTATGTA TGGTATGAAA AAAAAATAAT AGACAAAAGA TCCAATGTTC CTTTTCACCC
TCACGAAGGC TGATGAATAA GGTGAAATAA GACCCTTTTA TCTGCTCCTT GAAATTGTGC CTGGAGGTTA GCATGTTCTT TTACATGCAT GATTTGGGCC ATCCTGCACT CGCCTTTGTA
AAAAATATGC AGTCTTCCAA GAAGATGCCT GAGGGAATGA AATAGCCCCC GGTTGACTCG TTATGTGCTA TTAGTAGTCA TTCTTTGTAC CTATTTGAAA TGATTATTCA CAAGCAATGA
ACACATAATG AACTAATTTC TTGCACGGAT TCCCTTAGAT GGCATGATGC TGGTACATTT GATAAAACGA TGAAGACTGG TGGTCCAAAT GGGTCGATAA GAAATGAGGA AGAGTATAGA
CATGGTGCAA ATAATGGTCT AAAAATAGCA TTGAACTTTT GTGGTAAGAG CTAAGTTTGA TCACTTTGTC TTTGTTTGTT TGCTCATATT TTATCTCCCT TCAGTAGTGC ATATTGTAGT
TATTCTGTTT TGATATTTTT CTATTCACAA ATTGGATTCA GTTTGTGCAT GGTGCAAATT TGCTGTTTCA CTTCTGTACC ATATTGAGCA TGTAGATGCT GAAACTTAGG ATGCTTTGGC
AGATCTAATT GCTCTTGTCT GTTATTCTCA AGATAAACAC CAACAGACAT CTCTTGAGAC AGTACTTCGA CAAAATTTGT TCAAACTCGT TGAGAAACAC ACTTAAATTT TGTGAGTTAG
ATAATGGTTC ATGTAGCTGG CCACTGTGCC CCCATTTTCA GGAGGCAGCC CTTCTCCTGA GGCTAGTGTG GGCCAATCAT GCTTTATCAA AACTGTATGC AACCAGGGCC TAAATGGAAC
AACTATAGGT CATTTGCATT TTTATGTCCA ATGGTGGCAC TCTGCACTAC TCATGAGTTC CTGAATATCG TACTATTAGG GATGAGTTTG CATTGTCTGT TCTTATGAAC TAGAGATGCA
AAAATAATTC TTCCTTTCAA ATATACCTAA TGTCAAATAT TTTATTTCCT TCAGAAACAA GTTGAAGTTT CATTTTTCCA CTATGCACAG TGATGAGTCA CCTGTAACCC CGGTCTCTCT
TTGGCCTTCA AGTGGACCAA TTTGGACCCC TTAAGAAGGT TAAGGATTGC ATAGAGTTGC TTTGTTTTAC CCATGATTTT TCCTGGCTGG GTTGCCATCA TTTAGGTATT AGGCTCGGGC
TTCTTTCCTT TCTAACTTGG TTCTTTTATG TTAAGATGGA TGTTTAGCAT TTAATACCTT AGATACTAAT AATGTTTATT TTATTGTTGA GAAAAGGGGA AAAAATCAAT GCAAACATTA
TTGTATTTTG AAATCCTGTT TCAGCAACTT CTTTGTTCAA GTCTTCAAGA GTCCAAAATT GAAAACCAAA ACTGGAAATG GGTCGAGGGG TATGTGTTGA GTCATTTGAT GTTTGAACCT
GAATTTAGGG TTTGGATTAG TTCATCAGGG TCCATGCTAC TTTGGATTCA GGACATAATT AGAGCTTTAT TTTGAAATTT TTGGGTATAG TTTGAGCCAT TGAGTGGTTT TTGTGTCTCC
AGTGGATTTC TAGGCTTTGT GTGGGATTCA GATTTGAATC TAGATCTCCG ATTCAGGCCC TTTTTGGCTT GAATTTCGAG TTCTATTTTG GGTTTGGCAA CTAGATTTCG ATTGTGAGCC
CATATTTGGA TCTTGTTATA CCAAAATGCT GCTTTACAAT GTGAACTTCT AATAAAGTAG TAGCACTTTT CTCAAATGTT GTTTCTCACT TCTCAGTAAT TATTTATTCT TGAGGGAAAG
CATCATGTTA TGTGATATTT TTTTCATGAT GCCATCTCTG AGGTTCATAA CCTGATGAAT GTCCTTTCCA AGTGAAGGAT CAAGTTTTTG TGATTCTTTA ACTTAAAACA AATTTACAGA
GAAATAATAT TTTAGGATGA TCATCACTTT CAGTGCACAA CAAAAAAATA ATTTTGTTCT CCATGGCTTG CATGCGAATT CATGTAAACT CTACAAAAAT TTGTTCTTGT GCAAAAAATA
CAATGCAATG CATATTTAGT TTAACATAGC AACTATGAGT TAATACTAAA ACTATTGATT TTTTCCCTCC TCTTCTTGAT ATCAGAGGAA ATTAAGGCAA AATGTCCAAA GATTACTTAT
GCAGACCTCT ACCAGGTACA AGTGATTTTC TGAGGGTTTG ACCATTAGAC TTTCTTCCTT TTTTCTTTCT TCATATTAGA AAGAAATGAT GCTATTGACA ATTTACAAGT ACCTGTTCTA
TACTGCACAA CTGGGGCTTG TAGCTTTCTG TTTTTCTCAG TTTATGTCTG TTACTGCTGA GATGCAGAGA TTATTTCTGA CAGTTGTTTG CATTTAATGA TTTCATTCAT TTCTTTGGAG
TAAAAGACTA AAAGTATTTG TCAGTGACTT GACCTCGTAG TCTCAATTGG CTTAGACCGG TAAAGGACAT GGTTGCTGCT TACTCCTACG TTCTTATTTT ACTTTGTAAT TGATATTTTC
TTTATGCAAA ATTATTCTGC ACTGTTTCAT AATTTCTTTC AGTTCAAATT CTGAAAATGG AAAAAATTTA GAATGGAGGG ATACATACAC TAAAATTACT ATAAGTTTCT GAGAAAGGAA
AGGACAAAAT AGATTTTAAG CTAGCTTACA TCAGCAAAAT TTTCTTGGTT CATTTCTTTG TATGAATCCT GTAATAATAT CTCTGATGCT TGCTGAATCT GAAAATGTGC TGAAAGTTGT
GAAATGGGCT TCTTTAGAAG GCCAACTGAA CTGTTGAAGC TAGTGGAGAC ATATGTATGC TCTCATGTTT GCAATTGCCA ACGGAAACTC AATTACTTCC TCCTTCATGC CCAAGATAAG
AGTACCCTAA ATATGATATT TTTGTAAAAT TCCATTAATT AGGAGCTGAA CAGTCATTGG CAACGTGTAC ATGCTATAAC TTATGCTCGG TGAGTTATTC TCCTATTGCC AGAAATATCT
GAACAGGACA TTTTTCAAAT TTGTTTATTC AGCTTGCTGG TGTTGTAGCG GTTGAGGTCA CTGGAGGACC CACTGTGGAC TTTGTTCCTG GCCGTAAGGT ATTCTGATAA GCAACATGAG
TATCTTAGGT GCTGCTTGCA TATAAGTATT TTATTTATCA AGTTATTTTT TTTTCTTTTT CAGGACTCAT TGGTTTCTCC AAAAGAAGGA AGGCTTCCTG ATGCTAATAA AGGTTGGCTG
GAACTAAGAA TGAACTTTTT TTCTTGGCCC TTATTTAAGT CAGTTTACCA TAGCAAGTTA TATATCTGCA AGTGTATGCT CTAGTTTTTA TCGTTTCCTT ATCTATTTGT GAAGTGATTT
CTGTCCTTGG TGTCTCTGAA CATTGTATGG TATTCAATTT TTTAAGATGA GCTGCATGTG TGCTTTACAT ATCAAGCAAT AAATTCTTCT TTAAAATAAA TAATAATGTA GATAGTAAAA
TAAAGATTGG CTAGCTGGTT TTGTTGTTGC TTCATGAGTT TCTGATCTGA AAATAGTATA TGGCCAGACT TTCAATTCAG CTGCTATTAT AACTTTATAG GATTTATGTT TTTCGAGCAT
TACTAACAAG TTTTGGTTTT AGGTGCACCA CATCTGAAGG ATATCTTCTA CAGGATGGGA TTAACAGACA AAGACATTGT AGCACTCTCA GGTGGTCACA CCTTGGTAAA TCTCTCTCCT
CTCTGAGATG TAAATATGCC GTGAATAAAA CTGTGCTCTC TCTCTCTCTC CCGATATAGA AATATGCTTC AATTGAAACT GTCAAACAGG GACGAGCACA TCCTGAGAGA TCTGGATTTG
AAGGTGCCTG GACTAAGGAG CCTCTGAAAT TTGACAATTC ATATTTCATG TGAGATGAAG CACATTTAAC TGTTTCCTTG TTCCAGCTCC AAATATCATT CAAATTGCGG TTTTTCTTTC
TTTTTAATCG TTTATATTAT GAAAATAATT TGTATATGGA TTTGCATTAA TCTGATGAGC ACTTTGCCAG TGAATTATTG AAAGAACAGA CAGAGGGATT ATTACAACTT CCTTCAGACA
AAGCTCTTTT GGAGGATCCT AACTTCCGAC CTTTTGTAGA GCTCTATGCA AAGGTTCGTC TACCTATTTA TGCATTACTA AAACTTATGA AAAAAGTTTT TTTTTCTTAT TTCCTTTTCT
TGAGAATATC AAGTGCAAGA AGAATTGTGA TTTTCCGTGA TGAGAGAAAG GGCATCCACC CACACCTATG TGACATAGAA AGGAACACAA ATTCTTTAAT GCAAATTGGC CAGGTGCACC
CTGAGTGATC TATCTGTAAA TGCCCAGTGA CTGCTTTTTA TTGGCAGTTC CTGATCCAAC TTATACTTTC CAAAATGACT GTGACTCTGA ATTTATACCT TAACAGATAC ACACAAACAC
ATACATACAG CTGCAATGGC CCATATTTTA TGCTCTTGGT TGATTCATTG TGCTTGTTCA GCACTCGTTA GCTTTAATTC TAAGAAGAAT ATAAAACTCA ATCACCTGCA GTGCATCAAA
GCATTAAAGG GAATCAGTTT TCTTTTTTAA CTTATTTGAT CTAAAACATG TTCAGTACAA AACATGTAAT GATACTCTAG ATCAAGCAAA GGCATCTGCC TCTTACAATT TTTACTGGAC
AGTGGGGTGA TGATAAATTA TCACGATGGC CCAAGGCACC ACTGGGACTG TGATCTGGTT GCAGTAGCCA TACGGAGCGT TGGCCTGCCA GGTTTTTGAT AGTAAATGTG AGTGGATGTT
AGAATAAATG GAGAAACCAT GTATAAAAGT TTATTATGCG ATTGCAGTTT TATTTCATTT TCTCACATGA GAAAATTAAA TCTCTTTTGC TACTTGATAT ATTTTTTTGA AGCACGGATT
TCTTGTTACC ATCATATGCT GATGACACTG TTGTTTCAGA TTAAGCAATA TTTTCCAATT CTGGTGCAGG ATGAAGAATT GTTTTTCAAA GACTACGCAG AATCGCACAA AAAACTCTCT
GAGTTGGGCT TTACACCTCC TGGTCCTAGA CCAGTTAAGT CTGCTACCAT ATTGGCACAG AGTGCAGTTG GTGTTGCTGT TGCCGCTGCT GTGGTGATAT TAAGCTATAT GTATGAGGTC
CGCCGGAAGT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGTCTC CAGTGGTGGA CGAGGCATAT CTGAAGGAGG TCGACAAGGC CCGCCGTCTT CTTCGAGCGC TCATCGCTCA GAAGGGCTGC GCACCGATCA TGCTTCGATT GGCATGGCAT
GATGCTGGTA CATTTGATAA AACGATGAAG ACTGGTGGTC CAAATGGGTC GATAAGAAAT GAGGAAGAGT ATAGACATGG TGCAAATAAT GGTCTAAAAA TAGCATTGAA CTTTTGTGAG
GAAATTAAGG CAAAATGTCC AAAGATTACT TATGCAGACC TCTACCAGCT TGCTGGTGTT GTAGCGGTTG AGGTCACTGG AGGACCCACT GTGGACTTTG TTCCTGGCCG TAAGGACTCA
TTGGTTTCTC CAAAAGAAGG AAGGCTTCCT GATGCTAATA AAGGTGCACC ACATCTGAAG GATATCTTCT ACAGGATGGG ATTAACAGAC AAAGACATTG TAGCACTCTC AGGTGGTCAC
ACCTTGGGAC GAGCACATCC TGAGAGATCT GGATTTGAAG GTGCCTGGAC TAAGGAGCCT CTGAAATTTG ACAATTCATA TTTCATTGAA TTATTGAAAG AACAGACAGA GGGATTATTA
CAACTTCCTT CAGACAAAGC TCTTTTGGAG GATCCTAACT TCCGACCTTT TGTAGAGCTC TATGCAAAGG ATGAAGAATT GTTTTTCAAA GACTACGCAG AATCGCACAA AAAACTCTCT
GAGTTGGGCT TTACACCTCC TGGTCCTAGA CCAGTTAAGT CTGCTACCAT ATTGGCACAG AGTGCAGTTG GTGTTGCTGT TGCCGCTGCT GTGGTGATAT TAAGCTATAT GTATGAGGTC
CGCCGGAAGT GA
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Retrieve as FASTA
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