Entry information : PtaPrx[P]122(PTA00083200)
Entry ID 17009
Creation 2021-04-01 (Christophe Dunand)
Last sequence changes 2021-04-01 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2021-04-09 (Christophe Dunand)
Peroxidase information: PtaPrx[P]122(PTA00083200)
Name PtaPrx[P]122(PTA00083200)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx[P]122
start..stop
S start..stop
PtaPrx119 554 0 1..307 1..326
PabPrx122 539 0 1..307 1..326
PtaPrx118 498 3e-180 9..307 1..317
PabPrx108 497 1e-179 1..307 1..326
Literature and cross-references PtaPrx[P]122(PTA00083200)
Protein sequence: PtaPrx[P]122(PTA00083200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   307
PWM (Da):   %s   32342.23  
PI (pH):   %s   8.55
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKTTTARNLM AALASLLLFS CVFSDASGGL ALNFYDKTCP AVYNSVESVV GQYISKAPTL AVPLLRMQFH DCFVRxxxxx SLRGFQVIDG AKAAVEKVCP GVVSCADILA LVAPDAVHML  GGPFWNVPTG RRDGMVSIAN EALTKLPPPF ANFSQLTSMF ASNGLDVKDL AVLSGAHTIG TSHCSSFSSR LYNFTGKGDT DPSIDKYYAA QLKIKCKPGD SKTRVAFDPG SFRTFDTNYY 
VNVNKKRGLF HSDGALLTNN EAKAYVNEEL QGPSFFSDFA TSMEKMGRIG VLTGTAGQIR GHCAFIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction PTA00083200 contains 3 other ORFs
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCTA CCAGTCTGAG ATCGGTAGTC TTTCTTGTGC TCACGGTAGC AATAGTTGTT TCCGATGCGC AGTTACAGCT GTCAGAAACG TTCTATGATG CCACATGTCC ACAAGCCGCA  TCCATCGTCC AACAGAAGGT GAATGCGTTT GTGGATGCCG ATCGAGGCCT CGCTGCAGCT TTGATGCGAC TTCATTTCCA CGATTGCTTC GTCCGGGGTT GCGATGGATC CGTCCTTCTC  AATTCTACCG AGTCTATGCT GACTGAGAAA GAAGCGTTGC TCAACAAAGG TTCTTTGAGG GGATTTGAGC AGATTGACGA AATAAAGATG GAGCTTGAGT GCGCATGCCC AGGTGTGGTA  TCTTGTGCTG ATATTTTAGC ATTGGTCGCC CGAGACGCTA CCGCTAAGGT TGGTGGCACT AGCTGGCCCG TGTTTCTGGG CCGTATAGAT GGAGGTGCTT CGTTCGCAGA CGAGGTCAAC  AGTAGTTTAC CCGAACGTAC AGACAACTTC ACGCAACTCG TCGCCAGGTT CGCCAGAGTT GGACTCGATG CCAGAGACAT GGTTATATTA TCAGGAGGAC ATTCTATTGG ACAAGTTCAC  TGCGGTGCAT TTTTCGAGCG CCTCTACAAC TTCCAGGGAT TGAACATTAC CGATCCCGCC ATGGACCCTG AGTTCGCTGC TATGCTCAAG GTCCAGTGCC CTCAGACCAA GCCCTTTGGA  TTCATGGCTC TGGACGCCAC CAACGGCACC TTCGACTCCG CGTACTACTT GGACCTGCTG ACGAACAAGG GCCTGCTGGA GTCCGACGTG GCGCTCTTGA GCGACCCTCT GGGCGTGGAA  TATGCCATCA GAGCGGTGCA AGATCCCATG GCCTTCTTGA ACGAGTTCGG ATGGGCCATG ATCAAAATGG GCGCGATTCC TGCTCTCGAG CCATACGGTT GGAGAAGACA CTGTGCCTTT 
GTTGAACCCA AATATTAG 

Retrieve as FASTA