Entry information : PtaPrx123(PTA00034039)
Entry ID 17020
Creation 2021-04-08 (Christophe Dunand)
Last sequence changes 2021-04-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-06-02 (Christophe Dunand)
Peroxidase information: PtaPrx123(PTA00034039)
Name PtaPrx123(PTA00034039)
Class Class III peroxidase     [Orthogroup: Prx018]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx123
start..stop
S start..stop
PabPrx36 565 0 1..324 1..324
PabPrx39 505 0 1..324 16..336
PgPrx05 484 4e-174 1..323 9..328
PtaPrx21-2 481 8e-173 1..323 1..323
Literature and cross-references PtaPrx123(PTA00034039)
Protein sequence: PtaPrx123(PTA00034039)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324
PWM (Da):   %s   34224.33  
PI (pH):   %s   6.76
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALRIVNSLL LLVFLRPTLA QNSLSVGFYN AKCSQAESIV RGVITSHYAI DQSLPAALLR MHFHDCFVKG CDGSILIDSV GNNVSEKEAG PNLTVRGFEI IDEAKALLES ACPGVVSCAD  IIALATRDAV SLAGGQQYNL PTGRRDGRIS SINNVNLPAP SFQVSQAAAA FAKKGLTLQD MVILLGAHTV GVAHCSFFSD RLYNFQGSGT ADPSMDATLV ASLKNICPSP TSSSTDDPTV 
FLDQNTSFAF DNSYYQQLQL NHGILQIDQE LTSAGSTKGI VTNLASDGTT FSKSFAGAMI KMGNIGVLTG KKGEIRTNCR VVNP 

Retrieve as FASTA  
Remarks Incorrect prediction (only exons 3 and 4 have been found due to N in the sequence). Found in tscaffold5196 106059-104777, contains 5 other ORFs
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCAGGAGGGC CTCAGTACAA TCTACCAACG GGAAGAAGAG ATGGAAGGGT ATCTTCAATA AACAATGTAA ATTTACCGGG TCCCACCTTC CAAGTTTCTC AAGCAGCTGC AGCATTCGCA  AATAAGGGTC TCACACTCCA AGATATGGTC ACTCTGTTAG GTACGTATTA TCAATTGTAC TATACATAAT CTGGCCGTTA CGTTTACTTG AAAAAGCAAT GGAGTGAAAT TTACTCTCTG  TTCTGCCTTC AAATTCAGGC GCGCATACTG TTGGGGTCGC GCATTGCAGT TTCTTCAGCG ACAGACTCTA CAATTTTCAA GGAAGCGGGA CGTCGGATCC TTCCATGGAT CCAACCTTAG  TGGCGACCCT GAAGAATGTT TGCCCGTCAC CGACCTCGTC TTCATCACAG AACCCCACCG TATTCCTCGA CCAAAATACT TCGTTTGCTT TCGACAACAG CTACTACCAA CAAGCTCAAT  TAAAGCATGG AATTCTGCAA ATAGATCAGG AACTTACCTC TGCTAGATCA ACGAAGGGTA TCGTAACGAG CTTGGCCTCT GACGGAACTA CATTTAGTAA GAGCTTCGCT GCTGCCATAA 
TAAAAATGGG GAACGTCCAA GTATTAACAG GCAAGAATGG AGAAATTAGA ACAAACTGCA GAATTGTGAA TCCGACGAGG AGGACAACGC AATTGTAA 

Retrieve as FASTA