Entry information : PtrtrPrx06
Entry ID 1720
Creation 2007-10-01 (Christophe Dunand)
Last sequence changes 2007-10-01 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: PtrtrPrx06
Name PtrtrPrx06
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus tremula x Populus tremuloides    [TaxId: 47664 ]
Cellular localisation N/D
Tissue types Barks
Cambium
Leaves
Roots
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtrtrPrx06
start..stop
S start..stop
PtPrx57 551 0 4..281 74..351
PbPrx05 551 0 4..281 74..351
PtPrx67 476 5.48e-171 6..281 77..352
RcPrx46 454 8.98e-164 3..281 2..280
Literature and cross-references PtrtrPrx06
Literature Unneberg,P., Bhalerao,R.R., Jansson,S. and Sterky,F. The poplar tree transcriptome: Analysis of expressed sequence tags from multiple libraries.
EST ref. GenBank:   BU886693  CK109909 [3' end]
Cluster/Prediction ref. UniGene:   Ptp.2344
Protein sequence: PtrtrPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   281
PWM (Da):   %s   30493  
PI (pH):   %s   4.58
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACFVSFHDCF VQGCDGSVLL DGSASGPSEQ QADPNLTLRA KAFEIIDDLH ERIHKECGRV VSCADIVAIA ARDSVYLSGG PEYDVPLGRR DGLNFATQNA TLANLPPPTD NASTILRSLA  AKNLDATDVV ALSGGHTIGI GHCGSFTERL YPTQDPTMEK TFAEDLKGIC PTNTSTNTTV LDIRSPNKFD NKYYVDLVNR QGLFTSDQDL YSYKKTRGIV KSFAEDEALF FEKFVVAMIK 
MSQLSVLSGN QGEIRANCSV RNSDNSYLVS EVEEDLETKS E 

Retrieve as FASTA  
Remarks Partial sequence from 9 ESTs. 5' end is missing. Strain="T89".