The peroxidases and oxidases database
Entry information : PtrtrPrx06
Entry ID 1720
Creation 2007-10-01 (Christophe Dunand)
Last sequence changes 2007-10-01 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: PtrtrPrx06
Name PtrtrPrx06
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus tremula x Populus tremuloides    [TaxId: 47664 ]
Cellular localisation N/D
Tissue types Barks
Cambium
Leaves
Roots
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtrtrPrx06
start..stop		 S start..stop
PbPrx05 531 0 4..281 74..351
PtPrx57 531 0 4..281 74..351
PtPrx67 476 5e-171 6..281 77..352
RcPrx46 454 9e-164 3..281 2..280
Literature and cross-references PtrtrPrx06
Literature Unneberg,P., Bhalerao,R.R., Jansson,S. and Sterky,F. The poplar tree transcriptome: Analysis of expressed sequence tags from multiple libraries.
EST ref. GenBank:   BU886693   CK109909 [3' end]
Cluster/Prediction ref. UniGene:   Ptp.2344
Protein sequence: PtrtrPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   281 (301)
PWM (Da):   %s   30493 (33031.8)  
PI (pH):   %s   4.58 (8.93) Peptide Signal:   %s   cut: 23 range:23-323
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ACFVSFHDCF VQGCDGSVLL DGSASGPSEQ QADPNLTLRA KAFEIIDDLH ERIHKECGRV VSCADIVAIA ARDSVYLSGG PEYDVPLGRR DGLNFATQNA TLANLPPPTD NASTILRSLA  AKNLDATDVV ALSGGHTIGI GHCGSFTERL YPTQDPTMEK TFAEDLKGIC PTNTSTNTTV LDIRSPNKFD NKYYVDLVNR QGLFTSDQDL YSYKKTRGIV KSFAEDEALF FEKFVVAMIK 
MSQLSVLSGN QGEIRANCSV RNSDNSYLVS EVEEDLETKS E 

Retrieve as FASTA  
Remarks Partial sequence from 9 ESTs. 5' end is missing. Strain="T89".