Entry information : PtreAPx01
Entry ID 1737
Creation 2007-10-01 (Christophe Dunand)
Last sequence changes 2007-10-01 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2007-10-01 (Christophe Dunand)
Peroxidase information: PtreAPx01
Name PtreAPx01
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus tremula (European aspen)    [TaxId: 113636 ]
Cellular localisation Cytosolic
Tissue types Apical shoots
Cambium
Leaves
Petioles
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtreAPx01
start..stop
S start..stop
PtAPx03 405 2e-145 1..249 1..249
PbAPx02 405 2e-145 1..249 1..249
QshAPx01 378 1e-134 1..248 1..248
EgrAPx03 376 6e-134 1..249 1..249
Literature and cross-references PtreAPx01
Literature Unneberg,P., Bhalerao,R.R., Jansson,S. and Sterky,F. The poplar tree transcriptome: Analysis of expressed sequence tags from multiple libraries.
EST ref. GenBank:   BU821078 [5' end]   BU823873 [3' end]
Protein sequence: PtreAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249
PWM (Da):   %s   23103.73  
PI (pH):   %s   4.86
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKNYPTVSE EYSKAVEKAK KKLRSLIAEK SCTPLMLRLA WHSAGTFDVK TKTGGPFGTM RYSAELAHGA NNGLDIAVRL LEPIKEQFAI LSYADFYQLA GVVAVEITGG PEVPFHPGRE  DKPEPPPEGR LPDAxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxFEGPWTA NPLIFDNSYF KELLSGEKEG LLQLPSDKAL LSDPIFRPYV DKYAADEDAF FADYSEAHLK 
LSELGFADA 

Retrieve as FASTA  
Remarks Strain="T89". No overlap between 5' and 3' fragment, compile base on homology with other populus sequences.