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Entry information : PtreAPx01
Entry ID 1737
Creation 2007-10-01 (Christophe Dunand)
Last sequence changes 2007-10-01 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2007-10-01 (Christophe Dunand)
Peroxidase information: PtreAPx01
Name PtreAPx01
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus tremula (European aspen)    [TaxId: 113636 ]
Cellular localisation Cytosolic
Tissue types Apical shoots
Cambium
Leaves
Petioles
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtreAPx01
start..stop		 S start..stop
PtAPx03 405 1.77e-145 1..249 1..249
PbAPx02 405 1.77e-145 1..249 1..249
QshAPx01 378 1.66e-134 1..248 1..248
EgrAPx03 376 7.17e-134 1..249 1..249
Literature and cross-references PtreAPx01
Literature Unneberg,P., Bhalerao,R.R., Jansson,S. and Sterky,F. The poplar tree transcriptome: Analysis of expressed sequence tags from multiple libraries.
EST ref. GenBank:   BU821078 [5' end]  BU823873 [3' end]
Protein sequence: PtreAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249
PWM (Da):   %s   23103.73 Transmb domain:   %s   i5-22o
PI (pH):   %s   4.86
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKNYPTVSE EYSKAVEKAK KKLRSLIAEK SCTPLMLRLA WHSAGTFDVK TKTGGPFGTM RYSAELAHGA NNGLDIAVRL LEPIKEQFAI LSYADFYQLA GVVAVEITGG PEVPFHPGRE  DKPEPPPEGR LPDAxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxFEGPWTA NPLIFDNSYF KELLSGEKEG LLQLPSDKAL LSDPIFRPYV DKYAADEDAF FADYSEAHLK 
LSELGFADA 

Retrieve as FASTA  
Remarks Strain="T89". No overlap between 5' and 3' fragment, compile base on homology with other populus sequences.