Entry information : ZmPrx[P]22
Entry ID 175
Creation 2009-01-13 (Christophe Dunand)
Last sequence changes 2011-02-18 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-02-18 (Christophe Dunand)
Peroxidase information: ZmPrx[P]22
Name ZmPrx[P]22
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx[P]22
start..stop
S start..stop
ZmPrx22 630 0 3..335 2..338
ZmPrx146 630 0 3..335 2..338
ZmPrx87 605 0 30..335 28..340
SbPrx87 569 0 33..335 31..340
Literature and cross-references ZmPrx[P]22
DNA ref. GenBank:   AC205413.4 (76456..75452)
Protein sequence: ZmPrx[P]22
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335 (307)
PWM (Da):   %s   35637.71 (32882.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.65 (5.41) Peptide Signal:   %s   cut: 29 range:29-335
Sequence
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Send to Peroxiscan
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MGRSTCWLMP AALLVALIAA ASSSVALASP PGKLEVGFYE HSCPQAEDIV RNAVRRGIAR EPGVGAGLxx xRGCDGSILI NSTPGNKAEK DSVANNPSMR GFDVIDDAKA VLEAHCPRTV  SCADIVAFAA RDSTYLAGGL DYKVPSGRRD GRVSKEEEVL DNNVPAPTDE VDELIESFKR KGLNADDMVT LSGAHTIGRS HCSSFTQRLY NFSGQLGQTD PSLDPAYAGH LKARCPWPSS 
DDQMDPTVVP LDPVTPATFD NQYYKNVLAH KVLFISDNTL LDNPWTAGMV HFNAAVEKAW QVKFAKAMVK MGKVQVLTGD EGEIREKCFA VNPHY 

Retrieve as FASTA  
Remarks Pseudogene (chromo 10). FHDC is missing, frame shift before DAS and between DAS and SCADIL. Chromo position: 86006615 to 86005624.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGCGGT CGACATGCTG GCTGATGCCT GCTGCCTTGC TGGTGGCACT CATCGCCGCC GCCTCCTCAT CGGTGGCACT CGCCTCGCCG CCTGGGAAAC TTGAGGTCGG TTTCTACGAG  CACTCGTGCC CACAGGCCGA GGATATCGTG CGCAACGCCG TCCGCCGCGG CATCGCCCGT GAGCCCGGCG TAGGCGCGGG GCTGCGACGG CTCCATCCTC ATCAACTCCA CGCCGGGCAA  CAAGGCCGAG AAGGACTCAG TGGCCAACAA CCCCAGCATC CATGCGCGGC TTCGACGTCA TCGACGACGC CAAGGCCGTC CTCGAGGCGC ACTGCCCGCG CACCGTCTCC TGCGCCGACA  TCGTCGCGTT CGCGGCCCGT GACAGCACCT ACCTCGCCGG CGGCCTGGAC TACAAGGTCC CGTCTGGCCG CCGTGATGGC CGCGTGTCCA AAGAGGAGGA GGTGCTCGAC AACAATGTCC  CAGCTCCGAC TGACGAGGTC GACGAGCTCA TCGAGAGCTT CAAGCGCAAG GGGCTCAACG CCGACGACAT GGTCACGCTC TCTGGCGCGC ACACCATCGG CCGCTCCCAC TGCTCCTCCT  TCACGCAGCG CCTCTACAAC TTCAGCGGGC AGCTGGGGCA GACAGACCCG TCCCTCGACC CCGCCTACGC CGGGCACCTA AAGGCACGGT GCCCTTGGCC GTCCAGCGAC GACCAGATGG  ACCCCACGGT GGTGCCGCTT GACCCAGTCA CGCCGGCGAC CTTCGACAAC CAGTACTACA AGAACGTGCT GGCGCACAAA GTCCTGTTCA TCTCCGACAA CACACTGCTC GACAACCCAT  GGACGGCCGG AATGGTCCAC TTCAACGCCG CAGTCGAGAA GGCATGGCAG GTCAAGTTCG CCAAGGCCAT GGTTAAGATG GGCAAGGTCC AGGTGCTCAC CGGCGACGAG GGAGAGATCA 
GGGAGAAGTG CTTCGCCGTC AACCCACACT ACTAG 

Retrieve as FASTA