Entry information : TsCSD03(Thhalv10014873)
Entry ID 17556
Creation 2022-04-23 (Christophe Dunand)
Last sequence changes 2022-04-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2023-10-30 (Christophe Dunand)
Peroxidase information: TsCSD03(Thhalv10014873)
Name TsCSD03(Thhalv10014873)
Class Cu/Zn SOD    [Orthogroup: CSD002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsCSD03
start..stop
S start..stop
NoffCSD03-1B 300 2.18e-106 1..165 1..164
AtCSD03 299 3.58e-106 1..165 1..164
NoffCSD03-1A 296 6.76e-105 1..165 1..164
ThasCSD03 281 4.39e-99 1..165 1..165
Literature and cross-references TsCSD03(Thhalv10014873)
Cluster/Prediction ref. Genebank:   18017544
Protein sequence: TsCSD03(Thhalv10014873)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165
PWM (Da):   %s   16810.46  
PI (pH):   %s   6.79
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEAPAGGNLR AVALIAGDKN VRGCLQFTQD TSGTTHVTGK ISGLSPGFHG FHIHSFGDTT NGCISTGPHF NPLNRVHGPP DEEERHAGDL GNILAGTDGV AEISIKDKQI PLSGQYSILG 
RAVVVHGDPD DLGRGGHKLS KSTGNAGARV GCGIIGLQAS VDPKL 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAAGCTC CTGCGGGAGG CAATCTCAGA GCGGTGGCTC TTATCGCCGG CGATAAGAAC GTCCGAGGCT GTCTTCAGTT CACACAAGAC ACTTCCGGTG ATCTGTCTTC CCTCCCTTTA  TGAGGACATG TTTTATTTCA TTCATTGGGT TTACTTGCGT GTGGTCTTTG TGTGTGTCTT CTACAGGGAC TACCCATGTT ACCGGAAAGA TCTCAGGACT CTCTCCTGGC TTCCATGGAT  TTCATATTCA CTCTTTTGGT GATACCACAA ATGGCTGCAT CTCTACTGGT TTGTTTTTTT AGTCTATGTT ACTGTGTTAC TGTACTTGTC GAATCTGATA TTGAAATTCG ATGCTTTAGT  TGTTGGTTTC TTGTATTTAG TTGTGGTTAT ACTGAGTTTG ATTCACATTT TGGTGAGTTG GGTTTTTTTA TTGTACTTTC CGAAATCACC AAATAAAGGA CTTTTACTTT CATTTCTCCG  AGGTTTTTGT AGCTTGTTCT TATTAGAAGT CTTGAACTGT TTCTCGTAAG ATTCTTTAAC TGGAACACAT ATAATGAAAA AGTGTAATCT TGCTTGATCT TGATGTAACA GGATTGGTTT  GGATCAGATT TAGTTTAGAT GGACTCTTAG TGTTGCCAAA GAATTCACTC AAGGAACCAT TTCAATTAGC CTATAATAGA AGCAGAAACC TATTAAATCT TACTTCTAGA TGTTTGAATG  GTGTTTCATC TTTGTGATTC TATTGTGAGT TCTGTACTTG ATATTAAGGG TTGAGTTCTT TTGTTTTCTT GCGGAAATGT TAACTTCAGG ACCTCACTTC AATCCATTAA ATCGAGTTCA  TGGGCCACCG GATGAGGAAG AGCGTCATGC TGGCGATTTG GGTAACATTC TTGCAGGAAC AGACGGTATA CTCTTTGTTC CCTTATCTAT TTATATGTTT TGTGCCTTTT GAAGAATAAT  GCTAGAATTT TTGGATGAGA CTTGTTTCAG GTGTTGCTGA AATCTCAATC AAAGACAAAC AGGTACAAGA GTTCTTCTCT CTTCCCGGCT TCTTAGATTG TGCATATCTC TATTGACATT  TCCCCACTTA CCTCGGCTTC TCTTTGATTT CACAGATACC GCTTAGTGGC CAATATTCTA TACTTGGTAG GGCGGTTGTT GTACATGGTG ATCCTGATGA CCTTGGCAGA GGTAGGAACT  TACACAATGT CCAATGTCAC TCACTACATG CACAGCACTA GAAGTTTAAG GGTCAAATCT TAATAGTAAT CATTGTGTCT AGTTTCATTT AGTTTTCATC ATGTACCTGC CACTGTTCTT  AGGTTCATGT TTACCGTGCA GGAGGACACA AGCTTAGCAA ATCAACAGGA AATGCAGGCG CACGAGTTGG ATGTGGTATC GCTATACAAA CAACCAATTT GAAAAACAGA GCAACGCCAT 
TTCTGTTCCG TTTTTTCGTT TTGTTTTTTG TTCAGTGTGA CGTAACTCAC TCAGGGTTTT GATGTTGAAC CAGGTATTAT CGGGCTTCAA GCATCTGTGG ATCCTAAATT ATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAAGCTC CTGCGGGAGG CAATCTCAGA GCGGTGGCTC TTATCGCCGG CGATAAGAAC GTCCGAGGCT GTCTTCAGTT CACACAAGAC ACTTCCGGGA CTACCCATGT TACCGGAAAG  ATCTCAGGAC TCTCTCCTGG CTTCCATGGA TTTCATATTC ACTCTTTTGG TGATACCACA AATGGCTGCA TCTCTACTGG ACCTCACTTC AATCCATTAA ATCGAGTTCA TGGGCCACCG  GATGAGGAAG AGCGTCATGC TGGCGATTTG GGTAACATTC TTGCAGGAAC AGACGGTGTT GCTGAAATCT CAATCAAAGA CAAACAGATA CCGCTTAGTG GCCAATATTC TATACTTGGT  AGGGCGGTTG TTGTACATGG TGATCCTGAT GACCTTGGCA GAGGAGGACA CAAGCTTAGC AAATCAACAG GAAATGCAGG CGCACGAGTT GGATGTGGTA TTATCGGGCT TCAAGCATCT 
GTGGATCCTA AATTATAG 

Retrieve as FASTA