Entry information : TsMSD01-1A(Thhalv10021449)
Entry ID 17560
Creation 2022-04-23 (Christophe Dunand)
Last sequence changes 2022-04-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2023-10-30 (Christophe Dunand)
Peroxidase information: TsMSD01-1A(Thhalv10021449)
Name TsMSD01-1A(Thhalv10021449)
Class Mn SOD    [Orthogroup: MSD001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsMSD01-1A
start..stop
S start..stop
NoffMSD01-1B 443 6.74e-161 1..231 1..231
NoffMSD01-1A 442 1.12e-160 1..231 1..231
AtMSD01 441 3.51e-160 1..229 1..229
ThasMSD01 421 2.28e-152 1..230 1..232
Literature and cross-references TsMSD01-1A(Thhalv10021449)
Cluster/Prediction ref. Genebank:   18023406
Protein sequence: TsMSD01-1A(Thhalv10021449)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   231
PWM (Da):   %s   25359.13  
PI (pH):   %s   9.09
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIRSVATRK TLAGLKETSS RLLGFRGIQT FTLPDLPYDY SALEPAISGE IMQLHHQKHH QTYVTNYNNA LEQLDQAVNK GDASTVVKLQ SAIKFNGGGH VNHSIFWKNL APVNQGGGEP 
PKGALGGAID THFGSLEGLV KKMNAEGAAL QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGASLVPLVG IDVWEHAYYL QYKNVRPDYL KNVWKVINWK YASEVYEKEC K 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGATTC GTTCTGTAGC GACTAGAAAA ACCCTAGCCG GATTGAAGGA GACATCTTCG AGGCTCCTGG GATTCCGTGG AATTCAGACC TTTACGCTTC CTGATCTTCC CTATGATTAT  AGCGCTCTGG AGCCGGCGAT TAGCGGCGAG ATTATGCAGC TTCATCACCA GAAGCACCAC CAGACGTATG TTACTAATTA CAACAATGCC CTCGAGCAGC TGGATCAGGC CGTGAACAAG  GGAGACGCTT CCACTGTCGT CAAGTTGCAG AGCGCCATCA AGTTCAACGG CGGAGGTGTC TTGACTTTTT TTTTTCATTT CTAATTGAAT CGATTTTCTT TATTTTTCGA TCTCGATCCT  GACTGTGTTT AATCGGTGGT TTGTGTTAGA TTGTGCTTAC TTGGAGTTAT TTCTGGGTGC AATCTAAGTC AATTTTAAAG CTTCGGCCTT TGTGATCAGT CGAATTGAGC TAAAAGAGTT  TAGCGATTAA AGTAGCTTAA TTAGTAGAGT GATAAATTGT GCTGAGTATT ATATGATTGT CAGATAAAAC CTCTCTCAGA GTCAGTTTAG AATTACTTAG TTTTGAGCTC AGAATCAGCT  TGATTGAAGA AATTCAAGAA AAAAAAAAAC TGAACTAGAG TTGTGGTTGT ATCTTCTTCT TCTTTTTCTT TAATGTTCCT TCTATAAACT ATGGGAAATG GATTGAGGTT TTTGTGCTAG  AGAATGTAAT TCATTGTGTC TATTTCTAAT GTGCAGGTCA TGTGAACCAC TCGATTTTCT GGAAGAACCT TGCTCCTGTC AATGTGAGCT TGTGTTTCAA GTTTTTGTCT ATTTCTTCCA  TTGCTTTGTT CTGTGCTTAA TGATTTGTTT AAACATGTAA CAGCAAGGTG GTGGAGAGCC ACCAAAGGGA GCTCTTGGCG GAGCAATTGA CACTCACTTT GGCTCCCTCG AAGGTTTGGT  GAAAAAAATG AACGCTGAAG GTGCTGCTTT GCAAGGCTCA GGATGGGTGG TTAGTAGTCT AGTTTCACCT TTCAATGTCA TCGGGTCACA TTGTTGTCTT TGGTGCTTTA CTTATAATCA  TAGTCATTGA TTTGCCTGTT TTCTCTTGAT TGATCCAGTG GCTTGGTTTA GACAAAGAGC TTAAGAAGCT TGTGGTTGAC ACAACTGCCA ATCAGGTACT TATCCATGAT ACGGATTTGT  TCAAAGATTT TAGCTTTACC AGCATTCTTG ATATTCATAA AGGTATGTGA TTTAAATGGA ATTCTAAGAA AAAGAGTTTG CTGTGGGTCA CAGGATCCAC TGGTGACAAA AGGAGCAAGT  TTGGTTCCTC TGGTGGGTAT AGATGTTTGG GAGCACGCCT ATTACTTGCA GGTAATAATA CTTGTTGTGA TCCCTTAAAC TCATAAGTTA AGCTTCAATT ACTCTTTAAT CATTAATGTT 
TCTCTTACAG TACAAGAATG TGAGGCCGGA TTATCTTAAG AACGTGTGGA AAGTGATCAA CTGGAAGTAT GCAAGCGAGG TTTATGAGAA GGAATGCAAG TGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGATTC GTTCTGTAGC GACTAGAAAA ACCCTAGCCG GATTGAAGGA GACATCTTCG AGGCTCCTGG GATTCCGTGG AATTCAGACC TTTACGCTTC CTGATCTTCC CTATGATTAT  AGCGCTCTGG AGCCGGCGAT TAGCGGCGAG ATTATGCAGC TTCATCACCA GAAGCACCAC CAGACGTATG TTACTAATTA CAACAATGCC CTCGAGCAGC TGGATCAGGC CGTGAACAAG  GGAGACGCTT CCACTGTCGT CAAGTTGCAG AGCGCCATCA AGTTCAACGG CGGAGGTCAT GTGAACCACT CGATTTTCTG GAAGAACCTT GCTCCTGTCA ATCAAGGTGG TGGAGAGCCA  CCAAAGGGAG CTCTTGGCGG AGCAATTGAC ACTCACTTTG GCTCCCTCGA AGGTTTGGTG AAAAAAATGA ACGCTGAAGG TGCTGCTTTG CAAGGCTCAG GATGGGTGTG GCTTGGTTTA  GACAAAGAGC TTAAGAAGCT TGTGGTTGAC ACAACTGCCA ATCAGGATCC ACTGGTGACA AAAGGAGCAA GTTTGGTTCC TCTGGTGGGT ATAGATGTTT GGGAGCACGC CTATTACTTG 
CAGTACAAGA ATGTGAGGCC GGATTATCTT AAGAACGTGT GGAAAGTGAT CAACTGGAAG TATGCAAGCG AGGTTTATGA GAAGGAATGC AAGTGA 

Retrieve as FASTA