Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
335 |
| PWM (Da): |
36381.38 |
Transmb domain: |
i13-35o |
| PI (pH): |
8.41 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKSEGDYKVT RRLMLMVLLV TISTLANVST AALQVGFYHS SCPQGEAIVR KVVKKAVRRD PSLxAGLLRL HFHDCFVRVC GCDASILVDS TLNSKAEKDH PANNPSLRGF DVIDKAKYWV
ESQCPQTVSC ADIVAFAARD SAAVLGGINY DVPAGRRDGR VSLFDDPTQH LPSFLADAEE LEKNFRRKGL SLDEMVTLSG AHSVGRSHCS SFTNRLYSSN STEILQDPSL ETGLGNKLRQ
MCPRQNSVDP TAPLDCHTPN RLDNQYYVNL MKGRGVLTSD QTLADSPLTA RIVRNNANNG GGWAKKFAAA MVKMGSIEVL TGEEGEIRKS CRVVN
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Retrieve as FASTA
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| Remarks |
Pseudogene or sequence errors. Not predicted from NCBI but found using braker (Iponil2_g36084.t1). Frame shift in the exon 1 and extra intron in last exon. |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAGAGTG AAGGAGATTA TAAAGTGACA AGAAGGTTAA TGTTGATGGT GCTTCTAGTT ACAATATCTA CGCTAGCAAA TGTTTCAACG GCTGCCTTAC AAGTAGGGTT CTACCACTCG
AGTTGTCCTC AGGGAGAGGC CATTGTGAGA AAGGTGGTGA AGAAAGCAGT GCGGCGAGAT CCCTCCCTCG TGCTGGCCTC CTGCGCTTGC ATTTTCACGA TTGTTTTGTT AGGGTATGCT
AATATTTTTC ATAATATATA GGCCCTGTTT GGTAAAATGA CTAGTTGTTA GCTGATTGTG TTAATTAGAA AGTATAAATA GTTGATAACA TTAGCTGATT GTAGAAAAGT GTTTGGTAAA
TTAGCTGTTA GCTGTTATCT GTTTGGTATA ATTTCTTTTC TCAAAAAGCT AATTGAAAAA GTTGCTTGGG GTAGCTTTTT CAATTTTAGC CTTTTGGAGT TGCAAAAAGC TAATTAACCA
AACATTTATA TTGATTTTTT AACTAAATCA AACAATTAAT AGTGGTCAAA TAAGCCAAAA TTGGCCTATA GGCCAATTTT TTACCAAACA GGGCCATAAT TTTTTTTTTT TTCAATTTTT
TAATATGATA CTAAGGTTGC CCTTTATTTT TGTTGAATTA TATTGGGGGT GTTTGGTAAA TAGTTGTTTA GTAGTTTGAC TTGTCTGGTA AAGTCTTTGA ATGCTACTGA CTCGTATCTG
CTCGATCTCA TGACCTCTCA TATGGGAGAG GTCACTACAT GTCATCTGAG TACAAGGTGC TTGGCGCTAT TAGCTGTTTA CATACAAAAT GATTTTTTCA AAAAGTTGAT CAAATAAGTT
ACTTTTGAAC AATTTTTTGA ATTTTTACAT TTTAGAGCAA TAAGTTGTTA CAAAAAAAAA CTAATTAATC AAACTGATTG TTTAACCAAT TCAAATAGAC ACTAATAGTG GTTAAATAAA
CCAAAATTGA CCATTTTACC AAACAGGCCA AAGGCGAAAT ATTGATTATT TTTGTTGAAT TGAATTTTGA AATGGTAAAG GGGTGTGACG CTTCAATCCT TGTGGACTCA ACACTAAACA
GCAAAGCAGA AAAGGATCAT CCGGCCAACA ACCCTAGCCT TCGCGGCTTC GACGTGATCG ACAAAGCCAA ATACTGGGTG GAATCGCAAT GCCCGCAGAC CGTTTCCTGC GCCGACATCG
TGGCGTTTGC GGCCAGAGAC AGCGCGGCGG TGCTGGGAGG GATCAATTAC GACGTGCCTG CCGGGCGGCG CGACGGCCGG GTCTCCCTCT TCGATGACCC GACCCAACAC CTGCCGTCTT
TCCTCGCCGA TGCGGAGGAG CTGGAGAAGA ACTTCCGGCG CAAAGGGCTT TCGCTGGACG AGATGGTGAC GCTCTCCGGC GCGCACTCCG TCGGGAGGTC GCATTGTTCC TCGTTTACCA
ATAGATTGTA TTCTTCCAAT TCCACTGAAA TTCTCCAGGA TCCGTCCTTG GAGACCGGAT TGGGCAACAA GCTAAGACAA ATGTGTCCCA GGCAGAACAG TGTTGATCCT ACAGCTCCGC
TTGATTGTCA TACTCCAAAC AGGTTAGCAT AAACCTCCCT ATATACTTTT CATTCTTCTT CGGAAAAAGG ATCAAATAGG CCTTCAAACT ATCTTAAAAG TCAATTAGGT TCCTAAACTT
TTTAAAAGTG CAATTACACC TATCAATAAT TCATTTAGGT GCAATGAAGC CCAAAACAAG TTAATGACCT GCTATCACAA GTCATTAGGG TTCAGGCTGA CGAATTTTCC AACAAAAAAA
TGTGACCAGC AACGGACCCA GATTTATGGA AAATTTCGCC GGTCACTTCT TTTTTCGAAA ATTTCGCCGG TCACTTTTTT TTTTTTTTCG AAAAATTCGC CGGAAGGTGG CCTGAACCCT
AATGACCTGT ATCACAGGTT ATTAATTTGT TTTTTGGGCT TCATTGCACT TAAATGAATT GTTGATGGGT GTAATTGCAC CTTTAAAAAG TTTAGAGGTC TAATTGACTT TTAAGCTAAA
GTTCGAGGGC CTATTTGACC ATTTTCCCTT CTTCTTTCTT AAAAATGAAA AATGATATTT ATGGATTATT GATCTGTGTA ACTGTCAAGA TGAAAAAATG ATAAAAATGT CAAGATGGCC
GAGTTGGTCT AAGGGACAAG ACATTTTTTC CATTCTTCAG AGGCAATTTA GGGAACCAGT AGGCCAGTAT ATATCAAGTT GGCCCAATGG CTATTCCTCT ATTCCTCTAC TGACGAAGTT
CTTTAATTTA TTGATGAAAA ACAGGTTGGA TAATCAGTAC TACGTTAATT TGATGAAAGG TCGTGGAGTG CTAACCTCGG ATCAGACGCT GGCAGACAGT CCTTTGACGG CTAGGATTGT
GCGGAATAAT GCAAACAACG GTGGTGGATG GGCTAAAAAG TTTGCCGCTG CAATGGTGAA GATGGGCTCT ATTGAGGTCT TGACTGGGGA GGAAGGAGAA ATTAGGAAGA GTTGTAGGGT
CGTTAAT
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Retrieve as FASTA
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