Entry information : InPrx[P]125
Entry ID 17616
Creation 2022-05-03 (Christophe Dunand)
Last sequence changes 2022-05-03 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2022-05-03 (Christophe Dunand)
Peroxidase information: InPrx[P]125
Name InPrx[P]125
Class Class III peroxidase     [Orthogroup: Prx008]*
Taxonomy Eukaryota Viridiplantae Streptophyta Convolvulaceae Ipomoea
Organism Ipomoea nil    [TaxId: 35883 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value InPrx[P]125
start..stop
S start..stop
IaquPrx82 600 0 7..324 1..317
IaquPrx81 467 2.69e-167 4..324 6..327
InPrx91 454 2.34e-162 1..324 3..327
CanPrx01 451 4.22e-161 2..324 8..332
Literature and cross-references InPrx[P]125
Protein sequence: InPrx[P]125
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (300)
PWM (Da):   %s   34436.8 (31829.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.46 (4.44) Peptide Signal:   %s   cut: 25 range:25-324
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDCFNKMCIP LFLTAAMAAT MVFGQGTQVG FYSTTCPNLE TIVQSAVNSH FQSDPTVAPA LLRLHFHDCF VHGCDASVLI DGPNAEKTFL FNQGLRGYEV IDDAKQQVEA ACPGVVSCAD  ILTLAARDSV VLTNGPTWTV PLGRRDGLVS VASDASNLPA FTDSVDVQRQ KFSDKGLNTQ DLVTLVGGHT IGTSACQFFS YLQLQSNFSA NGPDPTIDPA FLATLQSLCQ GGDSTRAALD 
NGSGNTFDTS YFDNLSKNRG VLESDQKLWN DNSTKPIVEG FLGIAGVAGL TFSVEFATSM VKMSNIEVKT GSDGEIRRVC SAFN 

Retrieve as FASTA  
Remarks ¨Pseudogene or seuquencing error. No prediction from NCBI, found using braker (Iponil2_g37256.t1) (start of exon is missing due to frame shift)
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATTGCT TCAACAAAAT GTGCATTCCA TTGTTCCTCA CGGCAGCCAT GGCTGCAACA ATGGTGTTCG GCCAAGGCAC ACAGGTTGGG TTCTACTCAA CTACGTGCCC AAACCTCGAA  ACCATTGTCC AAAGTGCAGT GAATTCTCAC TTTCAATCCG ACCCCACAGT TGCACCAGCA TTGCTCAGGC TTCACTTCCA TGACTGCTTT GTCCATGGCT GCGACGCCTC CGTCCTCATC  GACGGCCCCA ACGCCGAGAA AACCTTCCTC TTTAACCAGG GGCTGCGTGG GTACGAGGTT ATTGATGATG CTAAGCAGCA GGTTGAGGCT GCTTGTCCCG GTGTTGTCTC TTGTGCTGAT  ATCCTCACTC TTGCTGCTCG AGACTCCGTT GTACTGGTAA TTATTTATTT ATATAATTAT ATATTTTTGA ATCCGAGTCA CTTGAAGGTG TCCACCAGCT AAGATTGTGC TGATCGGTGC  AAACTGAAAA GGCTAATAGG CAGCTCCCAC CGTCTTGATT GCCCTATATA ATTATATATG TTAACATACA TAATTAAATA TTGGTCATTA TTTTGTTTTA TAATTCCTGG ATTGTTCATG  CAGACTAATG GACCGACATG GACTGTACCT TTGGGACGAA GAGACGGTTT GGTTTCAGTG GCGTCCGATG CGTCTAACCT GCCTGCTTTT ACAGATTCTG TTGATGTCCA GAGGCAAAAA  TTTTCTGATA AAGGTCTTAA CACTCAAGAT CTTGTCACAC TTGTTGGTAA GTACTTTTTA AAATTTTATA ACTGATACAA TACCGCTCAC TCTTTCAAGA AAATTGTGAA CAGTAGTATT  TAAGTTGGTG TTAACCCGGT GACAAAATCT CAATTTACCC ACAAAAACGA GAAATTTTCT TGAGAGACGG GTGCATGACA GGACAACACT AGTGGAAATT ATGGCACCTG AAAAATTTTA  AATTAAGTTG ATACCAAAAA GTCCAAAAAG TAGTAGGAAA TAGCAACAAA GGATTTTCGG ATACCAAAAG TGGTCTGAAC AAGACTTTCG ACTTGATTTA AGTTCACTTT GAGGTGGTCG  GAAATTCCAT AATTTACACT AGTGCAAGTT AGAAGTGTCA ATGAGTCACA TTATTTAAAA TTTAAATAAC TTTTTTTTGT TGTGTTGAGA ATATTTAAAT TAAATATGAT ATTTGTTTGT  TGGTAGGGGG GCACACCATT GGAACTTCAG CTTGCCAGTT CTTCAGCTAC AATCAAACTT CTCAGCCAAC GGCCCAGATC CCACCATAGA TCCGGCCTTC CTCGCCACCC TGCAATCGCT  CTGCCAAGGC GGCGATTCCA CACGCGCGGC GCTGGACAAC GGCAGCGGGA ACACGTTCGA CACCTCGTAC TTCGACAACC TCAGCAAAAA CCGCGGAGTC CTCGAGTCCG ACCAGAAACT  GTGGAACGAC AATTCCACCA AACCCATCGT GGAAGGCTTT CTGGGAATCG CAGGAGTGGC TGGGCTGACG TTCAGCGTGG AGTTCGCGAC GTCCATGGTG AAGATGAGTA ACATCGAAGT 
TAAGACTGGC AGTGACGGTG AAATCCGCAG GGTCTGTTCT GCTTTCAATT GA 

Retrieve as FASTA