Entry information : NtPrx43-1B (Nitab4.5_0000376g0090)
Entry ID 17694
Creation 2022-08-17 (Christophe Dunand)
Last sequence changes 2022-08-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Peroxidase information: NtPrx43-1B (Nitab4.5_0000376g0090)
Name (synonym) NtPrx43-1B (Nitab4.5_0000376g0090)
Class Class III peroxidase    [Orthogroup: Prx026]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value NtPrx43-1B
start..stop
S start..stop
NtPrx43-1A 640 0 35..350 36..351
LePrx88 625 0 1..349 1..345
MePrx10 535 0 14..349 18..347
CroPrx51 533 0 5..350 2..352
Literature and cross-references NtPrx43-1B (Nitab4.5_0000376g0090)
Protein sequence: NtPrx43-1B (Nitab4.5_0000376g0090)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   350
PWM (Da):   %s   38461.67  
PI (pH):   %s   9.31
Sequence 0
Send to BLAST
Send to Peroxiscan
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MSFSAFSSSS FTIFMFLFFF LILPSSNSLL NSLSINATLR RQPRKLTVNY YAKTCPKVEI LVGSVTSQMF KDAPASGPAT IRLFFHDCFV EGCDGSILIS SKPGSKELAE KDAEDNKDLA  KEAFEGINKA KAVVESKCPG VVSCADILAI ATRDFVHLVG GPYYQVKKGR WDGKISKASR VHQNLPQSNS TVDQLLKIFS SKGLTPEDLV VLSGAHTIGF AHCKQFVNRL YDYKGTKKPD 
PYMDPRLLKA LKLSCPQFGG NVDIVAPFDV TTPFSFDNAY YGNLEAKLGL LASDQALSLD PRTKSFVQDL ANDKHNFFQA FAAAMEKMGN IGVKRGRKHG EFRKDCTMHM 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Uncorrect prediction from SGN (splicing error intron 2, and extra exon in 3')
CDS
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ATGTCTTTCT CTGCATTTTC TTCTTCTTCT TTCACCATTT TTATGTTCCT CTTCTTCTTC CTCATTTTAC CTTCCTCCAA TTCTTTGCTC AACTCCCTAT CCATCAATGC CACCCTCCGG  CGACAGCCTC GAAAACTCAC CGTTAATTAC TATGCCAAGA CTTGTCCTAA AGTTGAAATT CTCGTTGGCT CAGTAACCTC CCAGATGTTC AAAGATGCCC CTGCCTCTGG CCCTGCCACC  ATTCGCCTCT TCTTCCATGA TTGCTTTGTT GAAGGGTGTG ATGGGTCAAT ATTGATATCA AGTAAACCAG GAAGCAAAGA ATTAGCAGAG AAAGATGCAG AAGATAATAA GGATTTAGCT  AAGGAGGCAT TTGAGGGCAT AAACAAAGCC AAAGCTGTGG TGGAAAGCAA GTGTCCAGGT GTTGTTTCCT GTGCAGACAT TCTTGCCATT GCTACCAGAG ATTTTGTCCA CTTAGTTGGA  GGACCATATT ATCAAGTGAA GAAAGGAAGA TGGGACGGAA AAATATCAAA GGCATCAAGG GTGCATCAAA ATCTTCCCCA ATCAAACTCA ACGGTGGATC AACTTTTGAA AATCTTTTCC  TCAAAAGGAC TCACACCAGA AGACCTTGTG GTCCTCTCCG GCGCGCACAC CATTGGTTTT GCACATTGCA AACAATTTGT GAACAGACTC TATGACTACA AAGGGACCAA GAAACCTGAC  CCTTATATGG ATCCTAGGCT TCTCAAGGCT CTCAAATTGT CTTGTCCACA ATTTGGTGGC AATGTTGATA TTGTAGCACC ATTTGATGTG ACAACTCCTT TCTCATTTGA TAATGCTTAT  TATGGGAATT TGGAAGCTAA GTTGGGATTG CTGGCTTCTG ATCAAGCTCT GTCTTTGGAC CCTAGAACCA AGTCTTTTGT TCAAGATTTG GCAAATGATA AGCATAATTT TTTCCAAGCT 
TTTGCTGCTG CTATGGAGAA AATGGGAAAT ATTGGGGTGA AAAGGGGTAG AAAGCATGGG GAATTTAGAA AGGATTGCAC TATGCATATG TGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGCAATCTTC TCACGGGTGA TGATTCTCTT CGGAACATGG CTACTTCTTG TCTGTCTATA GCAGTCACCT TTCGATTTTT CCTATATACT TCTTCTCCAT TACTGTTTGC TATTTGTCTT  AGCCACTAAA CCAAACGACC ATGTCTTTCT CTGCATTTTC TTCTTCTTCT TTCACCATTT TTATGTTCCT CTTCTTCTTC CTCATTTTAC CTTCCTCCAA TTCTTTGCTC AACTCCCTAT  CCATCAATGC CACCCTCCGG CGACAGCCTC GAAAACTCAC CGTTAATTAC TATGCCAAGA CTTGTCCTAA AGTTGAAATT CTCGTTGGCT CAGTAACCTC CCAGATGTTC AAAGATGCCC  CTGCCTCTGG CCCTGCCACC ATTCGCCTCT TCTTCCATGA TTGCTTTGTT GAAGGGTGTG ATGGGTCAAT ATTGATATCA AGTAAACCAG GAAGCAAAGA ATTAGCAGAG AAAGATGCAG  AAGATAATAA GGATTTAGCT AAGGAGGCAT TTGAGGGCAT AAACAAAGCC AAAGCTGTGG TGGAAAGCAA GTGTCCAGGT GTTGTTTCCT GTGCAGACAT TCTTGCCATT GCTACCAGAG  ATTTTGTCCA CTTAGTTGGA GGACCATATT ATCAAGTGAA GAAAGGAAGA TGGGACGGAA AAATATCAAA GGCATCAAGG GTGCATCAAA ATCTTCCCCA ATCAAACTCA ACGGTGGATC  AACTTTTGAA AATCTTTTCC TCAAAAGGAC TCACACCAGA AGACCTTGTG GTCCTCTCCG GCGCGCACAC CATTGGTTTT GCACATTGCA AACAATTTGT GAACAGACTC TATGACTACA  AAGGGACCAA GAAACCTGAC CCTTATATGG ATCCTAGGCT TCTCAAGGCT CTCAAATTGT CTTGTCCACA ATTTGGTGGC AATGTTGATA TTGTAGCACC ATTTGATGTG ACAACTCCTT  TCTCATTTGA TAATGCTTAT TATGGGAATT TGGAAGCTAA GTTGGGATTG CTGGCTTCTG ATCAAGCTCT GTCTTTGGAC CCTAGAACCA AGTCTTTTGT TCAAGATTTG GCAAATGATA  AGCATAATTT TTTCCAAGCT TTTGCTGCTG CTATGGAGAA AATGGGAAAT ATTGGGGTGA AAAGGGGTAG AAAGCATGGG GAATTTAGAA AGGATTGCAC TATGCATATG TGAGTCTTGG  GTTGTTGGAT CTAATTTCTC CTAATTCTTC ATTTTTTTCA TTTGATTGTT ATTTCTTGGT CCTTTTTTTC CTTTTTATTT TGAAGGAATC TTGTACACAT CTATGATAGT GACTAAAAGC 
AAATAAAAAA GGAAAAACAT AATTTCTTTT GGCCTTAA 

Retrieve as FASTA