Entry information : SpPrx14
Entry ID 1777
Creation 2005-06-29 (Christophe Dunand)
Last sequence changes 2015-12-17 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2015-12-20 (Christophe Dunand)
Peroxidase information: SpPrx14
Name SpPrx14
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue type Rhizomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpPrx14
start..stop
S start..stop
SbPrx138 213 1e-70 1..120 1..119
ScPrx06 181 5e-60 1..120 1..116
HvPrx92 178 1e-58 1..120 1..116
TaPrx32 177 1e-56 1..120 1..116
Literature and cross-references SpPrx14
Literature Cordonnier-Pratt,M.-M. et al., An EST database from Sorghum: Sorghum propinquum rhizomes. Unpublished
EST ref. GenBank:   BG102981.1 [Fragment]
Protein sequence: SpPrx14
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   120 (89)
PWM (Da):   %s   12534.32 (9468.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.34 (8.50) Peptide Signal:   %s   cut: 32 range:32-120
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATFTCRSMA FVLSLAAVVL VALLTAGAAD AQKLSPNFYS KTCPNVATIV RQQMASAVAA EKRMGASILR MFFHDCFVNG CDGSILLDDT STFTGEKGAG PNANSVRGFE VIDAIKTKVE 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCACAT TCACCTGCAG GTCCATGGCC TTCGTCCTCT CCCTCGCCGC CGTCGTCCTC GTTGCCCTAC TCACCGCCGG CGCCGCGGAC GCGCAGAAGC TCTCCCCCAA CTTCTACTCC  AAGACGTGCC CGAACGTGGC CACCATCGTG CGGCAGCAGA TGGCGTCCGC CGTCGCGGCG GAGAAGCGTA TGGGCGCCTC CATTCTCCGC ATGTTCTTCC ACGACTGCTT CGTCAATGGC  TGTGACGGCT CCATCCTCCT GGACGACACG TCCACCTTCA CCGGCGAGAA GGGCGCCGGC CCCAACGCCA ACTCCGTGCG CGGGTTCGAG GTCATCGACG CCATCAAGAC GAAGGTGGAG 

Retrieve as FASTA