Entry information : SpKat01
Entry ID 1778
Creation 2007-09-19 (Christophe Dunand)
Last sequence changes 2007-09-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-19 (Christophe Dunand)
Peroxidase information: SpKat01
Name SpKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue types Meristems
Rhizomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpKat01
start..stop
S start..stop
SbKat01 1025 0 1..493 1..493
ZmKat3 970 0 1..493 2..495
OsKat01 910 0 1..493 1..492
CclKat01 801 0 1..493 1..493
Literature and cross-references SpKat01
Literature Jang,C.S., Kamps,T.L., Skinner,D.N., Schulze,S.R., Vencill,W.K. andPaterson,A.H. Functional Classification, Genomic Organization, Putatively cis-Acting Regulatory Elements, and Relationship to Quantitative Trait Loci, of Sorghum Genes with Rhizome-Enriched Expression. Plant Physiol. 142 (3), 1148-1159 (2006).
EST ref. GenBank:   DN551779 [3' end]   DN552369 [3' end]
Protein sequence: SpKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   493
PWM (Da):   %s   56407.19  
PI (pH):   %s   7.07
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPTKFRPSS SHDTTVTTTN AGAPVWNDNE ALTVGPRGPI LLEDYHLIEK VAHFARERIP ERVVHARGAS AKGFFECTHD VASLTCADFL RSPGVRTPVI VRFSTVIHER GSPETIRDPR  GFAVKFYTRE GNWDLLGNNF PVFFIRDGIK FPDVIHAFKP NPRSHVQEYW RVFDFLSHLP ESLHTFFFLF DDVGVPTDYR HMEGFGVNTY TFVNAAGKSR YVKFHWKPTC GVRSILTDEE  AALVGGRNHS HATQDLYDSI AAGSFPEWKL FVQVMDPDTE DQYDFDPLDD TKTWPEDLLP LQPVGRLVLD KNVDNFFNEN EQLAFGPGLV VPGIYYSDDK MLQCRVFAYA DTQRYRLGPN  YLMLPVNAPR CAHHNNHYDG AMNFMHRDEE VDYYPSRHAP LRQAPPVPIP ARPVVGKRQK ETIRKPNDFK QPGERYRSWD ADRQERFVRR FADSLGHPKV SQELRSIWID LLSKCDASLG 
MKIATRLNMK PNM 

Retrieve as FASTA  
Remarks Complete sequence from 54 ESTs. Cultivar="Hitchcock".