Entry information : SpPrx25
Entry ID 1788
Creation 2007-09-19 (Christophe Dunand)
Last sequence changes 2007-09-19 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: SpPrx25
Name SpPrx25
Class Class III peroxidase     [Orthogroup: Prx147]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue types Meristems
Rhizomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpPrx25
start..stop
S start..stop
SbPrx99 488 8e-176 1..300 2..336
ZmPrx85 461 3e-165 1..300 1..330
SiPrx89 392 7e-138 39..300 35..331
SbPrx101 214 5e-68 13..299 7..314
Literature and cross-references SpPrx25
Literature Cordonnier-Pratt,M.-M., Gingle,A., Sudman,M., Marsala,C. and Pratt ,L.H. An EST database from Sorghum: floral-induced meristems.
EST ref. GenBank:   BG465811 [5' end]   BG559019 [3' end]
Protein sequence: SpPrx25
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   301 (280)
PWM (Da):   %s   28771.49 (26788.4) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.61 (5.26) Peptide Signal:   %s   cut: 22 range:22-301
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSGSRVLFVV AAAVGVLLAA AAVSSGPVVV PLATGRPGAG GNDELSVYFH VESCPQLETI VRSAVDAALQ QNVRLTAGLL RVFFHDCFPQ GCDASILLDN GERGLPPNVG LQQEAVQLVE  DIRAKVHAAC GPTVSCADIT VLAxxxxxxx xxxxxxxxxx xxxxxxxxxx SGAHTVGKAR CSSFGDVAGP ATDDITRCVT ATCSAAGAGD TLRDLDFLTP AVFDNLYFIE LTLKKNKGVM 
LPSDQGLATD PRTSWLVQGF ADNHWWFFDQ FGTSMVKMSQ LKGPQGNVGE IRRNCLRPNT G 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs (BG241549). No overlap between 5' and 3' ends but compiled based on homologies with S. bicolor sequence. Floral-Induced Meristem 1 (FM1), Rhizome2 (RHIZ2).