1. Browse the Database
  2. View Redoxidase
Entry information : LpPrx02
Entry ID 1821
Creation 2007-09-07 (Christophe Dunand)
Last sequence changes 2007-09-07 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-27 (Qiang Li)
Peroxidase information: LpPrx02
Name LpPrx02
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon pennellii    [TaxId: 28526 ]
Cellular localisation N/D
Tissue type Pollens
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LpPrx02
start..stop		 S start..stop
LePrx93 412 1.05e-147 1..206 13..218
NtPrx51-1B 386 3.84e-137 1..206 13..218
NtPrx51-1A 387 3.86e-137 1..206 49..254
CroPrx42 310 2.25e-107 8..206 23..221
Literature and cross-references LpPrx02
Literature van der Hoeven,R., Bezzerides,J., Sun,H., Cho,J., Utterback,T., Hansen,C., Ronning,C. and Tanksley,S. Generation of ESTs from wild tomato (L. pennellii) pollen.
EST ref. GenBank:   BG138297
Protein sequence: LpPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   206 (294)
PWM (Da):   %s   22281.07 (31325.6)  
PI (pH):   %s   4.98 (8.15) Peptide Signal:   %s   cut: 35 range:35-328
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SLTLFSLTES KLNIDYYNKT CPQFDKIIQQ IVVDKQLAAP TTAAGALRLF FHDCMVGGCD ASLLISSNSF SQSERDTDIN LSLPGDAYDV VTRAKTALEL QCPGIVSCAD ILAVATRDLI 
TMVGGPFYSI RLGRKDSFES YAKDVEGHIA RPNMTMDTII NMFASKNLNV QEMVGIMGAH TIGFSHxSEI YKRLFxFSQT SESDPT 

Retrieve as FASTA  
Remarks Sequence from 6 ESTs. 5'and 3'are missing. TGI from Lycopersicum esculentum but sequences from pennillii!!!